RNA–Protein interactions for RNA: ENST00000556692.1

RDH11-208, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 801 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-208ENST00000556692 C9orf50Q5SZB4 431 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 FAM102BQ5T8I3 360 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 LRRC38Q5VT99 294 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 DUPD1Q68J44 220 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ACAD10Q6JQN1 1059 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 GJB7Q6PEY0 223 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 LVRNQ6Q4G3 990 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 NPNTQ6UXI9 565 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 DCDC5Q6ZRR9 648 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 PLPPR4Q7Z2D5 763 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 SRLQ86TD4 932 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 VSIG1Q86XK7 387 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 PHF13Q86YI8 300 aaPredicted RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 CBWD2Q8IUF1 395 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 NIPA2Q8N8Q9 360 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 BBOF1Q8ND07 529 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ZNF548Q8NEK5 533 aaPredicted RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 OR56A3Q8NH54 315 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ZNF564Q8TBZ8 553 aaPredicted RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 ATP8B4Q8TF62 1192 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 U2AF1L4Q8WU68 220 aaKnown RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 HDAC7Q8WUI4 952 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 AFG1LQ8WV93 481 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 TCP11Q8WWU5 503 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 PSPC1Q8WXF1 523 aaKnown RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 JPH3Q8WXH2 748 aaPredicted RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 MAML1Q92585 1016 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 P3H4Q92791 437 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 CENPTQ96BT3 561 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ARHGEF26Q96DR7 871 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 PGM2Q96G03 612 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 MS4A14Q96JA4 679 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 CEP170P1Q96L14 293 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ATP6V1G3Q96LB4 118 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 HS6ST2Q96MM7 605 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ZIM3Q96PE6 472 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 KRT12Q99456 494 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 FMO2Q99518 471 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ERP44Q9BS26 406 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 VN1R3Q9BXE9 311 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 FRMD8P1Q9BZ68 369 aaPredicted RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 THAP2Q9H0W7 228 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 STMN4Q9H169 189 aaPredicted RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 CCDC134Q9H6E4 229 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 LRRC19Q9H756 370 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 CNOT10Q9H9A5 744 aaKnown RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 PPCSQ9HAB8 311 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 EPB41L5Q9HCM4 733 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 MRPL47Q9HD33 250 aaKnown RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 UBE2TQ9NPD8 197 aaPredicted RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 XPNPEP3Q9NQH7 507 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 SNX15Q9NRS6 342 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ZDHHC18Q9NUE0 388 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 POT1Q9NUX5 634 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 GGA3Q9NZ52 723 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 DNMT3BQ9UBC3 853 aaKnown RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 MTRF1LQ9UGC7 380 aaKnown RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 SLC12A6Q9UHW9 1150 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 ZNF180Q9UJW8 692 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 MTUS1Q9ULD2 1270 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 PNMA8BQ9ULN7 279 aaPredicted RBP3.28□□□□□ -1.88
RDH11-208ENST00000556692 COG5Q9UP83 839 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 SLC45A1Q9Y2W3 748 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.28□□□□□ -1.88
RDH11-208ENST00000556692 ALG6Q9Y672 507 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 NFS1Q9Y697 457 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 PATJQ8NI35 1801 aa3.28□□□□□ -1.88
RDH11-208ENST00000556692 FRYLO94915 3013 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 ZFHX2Q9C0A1 2572 aaPredicted RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 UMODL1Q5DID0 1318 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 C5orf60A6NFR6 353 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 IFITM10A6NMD0 228 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 CCDC169A6NNP5 214 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 H7C4K7 107 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 M0R3H8 397 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 DDX39AO00148 427 aaKnown RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 CLIC1O00299 241 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 POLR3GO15318 223 aaPredicted RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 SLC16A4O15374 487 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 ASAP2O43150 1006 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 PHGDHO43175 533 aaKnown RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 CEP104O60308 925 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 TCEA3O75764 348 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 ZNF189O75820 626 aaPredicted RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 IL18RAPO95256 599 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 ASS1P00966 412 aaKnown RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 ABHD2P08910 425 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 CLTAP09496 248 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 WEE2P0C1S8 567 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 MYZAPP0CAP1 466 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 RARGP13631 454 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 UBA1P22314 1058 aaKnown RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 GLRA2P23416 452 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 ATP5DP30049 168 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 SLC7A1P30825 629 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 HSD17B3P37058 310 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 NSFP46459 744 aaKnown RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 GCLMP48507 274 aa3.27□□□□□ -1.89
RDH11-208ENST00000556692 AGFG1P52594 562 aaKnown RBP3.27□□□□□ -1.89
RDH11-208ENST00000556692 HMGCS2P54868 508 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms