RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MUC22E2RYF6 1773 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 TCF20Q9UGU0 1960 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 TRBV5-4A0A0C4DH59 114 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 A0A0U1RQS6 177 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 AGAP14A8MT82 685 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 E5RI56 91 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 AGPSO00116 658 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 KPNA5O15131 536 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SPINT1O43278 529 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 VPS26AO75436 327 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SASH3O75995 380 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 HAUS5O94927 633 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 MPOP05164 745 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 PKMP14618 531 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 HNRNPA2B1P22626 353 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 KELP23276 732 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 RPS3P23396 243 aaKnown RBP eCLIP9.14□□□□□ -0.959e-10■■■□□ 15.8
ACTN1-218ENST00000556343 TYK2P29597 1187 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 FMO4P31512 558 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 AKT1P31749 480 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 ACSL1P33121 698 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SERPINB8P50452 374 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 LIMK2P53671 638 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 MPP1Q00013 466 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 USP10Q14694 798 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SMAD1Q15797 465 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SEPT7Q16181 437 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 DBN1Q16643 649 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 TMEM259Q4ZIN3 620 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 TAF1BQ53T94 588 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 UBAP2Q5T6F2 1119 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 MROH9Q5TGP6 573 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SEL1L3Q68CR1 1132 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 CWF19L1Q69YN2 538 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 PSAPL1Q6NUJ1 521 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 PNCKQ6P2M8 343 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 ADAMTSL4Q6UY14 1074 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 RAPH1Q70E73 1250 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 BMP8AQ7Z5Y6 402 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 ZC3HC1Q86WB0 502 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 FOXJ1Q92949 421 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SCAMP4Q969E2 229 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 HIC2Q96JB3 615 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 ZNF514Q96K75 400 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 ATP6V1G3Q96LB4 118 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 PANX3Q96QZ0 392 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SH3GL2Q99962 352 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 FAM126AQ9BYI3 521 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 IQCGQ9H095 443 aaKnown RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 SYTL2Q9HCH5 934 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 TAS2R13Q9NYV9 303 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 MARCH4Q9P2E8 410 aaPredicted RBP9.14□□□□□ -0.95
ACTN1-218ENST00000556343 CRYL1Q9Y2S2 319 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 COQ6Q9Y2Z9 468 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 HS3ST3A1Q9Y663 406 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 CKAP5Q14008 2032 aa9.14□□□□□ -0.95
ACTN1-218ENST00000556343 A0A087X1B8 175 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 IGHV1OR15-9A0A0B4J2B8 117 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 FAM95CA0A1B0GW59 222 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 GPR89AB7ZAQ6 455 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 TRIM49D1C9J1S8 452 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 PRAMEF26H0Y7S4 382 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 CACNB4O00305 520 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 SLC31A1O15431 190 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 PI15O43692 258 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 VEGFDO43915 354 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 MAGEC1O60732 1142 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 PIAS1O75925 651 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 FAM155BO75949 473 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 RHOBTB1O94844 696 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 FSBPO95073 299 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 ASMTLO95671 621 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 C1QAP02745 245 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 FTH1P02794 183 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 PCCBP05166 539 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 HOXC4P09017 264 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 GSTM1P09488 218 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 GPR89BP0CG08 455 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 ATP1B2P14415 290 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 STMN1P16949 149 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 CHRM3P20309 590 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 SAT1P21673 171 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 CD9P21926 228 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 HTR1BP28222 390 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 GCAP28676 217 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 MAT2AP31153 395 aaKnown RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 CCT5P48643 541 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 KPNA2P52292 529 aaKnown RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 GSTM4Q03013 218 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 WSCD2Q2TBF2 565 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 TTLL9Q3SXZ7 439 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 GPRC6AQ5T6X5 926 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 HECTD2Q5U5R9 776 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 CNSTQ6PJW8 725 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 MACC1Q6ZN28 852 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 RFLNAQ6ZTI6 216 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 LDB1Q86U70 411 aaPredicted RBP9.13□□□□□ -0.95
ACTN1-218ENST00000556343 LCA5Q86VQ0 697 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 WDR5BQ86VZ2 330 aa9.13□□□□□ -0.95
ACTN1-218ENST00000556343 LONP2Q86WA8 852 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms