RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 KIAA1024LP59773 190 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 SNRPD1P62314 119 aaKnown RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 MTM1Q13496 603 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 SEMA5AQ13591 1074 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 BECN1Q14457 450 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 POLD3Q15054 466 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 EFHC1Q5JVL4 640 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 DENND1BQ6P3S1 775 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 LRRC31Q6UY01 552 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 GDPD4Q6W3E5 623 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 ARHGAP22Q7Z5H3 698 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 TFAP2DQ7Z6R9 452 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM135Q86UB9 458 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 OR2AP1Q8NGE2 309 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 FUBP1Q96AE4 644 aaKnown RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 C1orf74Q96LT6 269 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 UNKQ9C0B0 810 aaKnown RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 TKTL2Q9H0I9 626 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 WDCPQ9H6R7 721 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 FGF22Q9HCT0 170 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 MLXIPLQ9NP71 852 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 ANLNQ9NQW6 1124 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 ASNSD1Q9NWL6 643 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 ARHGEF38Q9NXL2 777 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 ZNF212Q9UDV6 495 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM59LQ9UK28 342 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 PHTF1Q9UMS5 762 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 ENTPD4Q9Y227 616 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 PKDREJQ9NTG1 2253 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 IGLV3-10A0A075B6K4 115 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 ARHGAP10A1A4S6 786 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 I6L893 689 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 CETN3O15182 167 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 PPM1DO15297 605 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 HSF2BPO75031 334 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 GRAP2O75791 330 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 DNAJB5O75953 348 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 RHOBTB3O94955 611 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 YEATS4O95619 227 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 MYL1P05976 194 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 KELP23276 732 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 TRIM23P36406 574 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 ACVRL1P37023 503 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 STAT1P42224 750 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 NOP2P46087 812 aaKnown RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 PGDP52209 483 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 GNA12Q03113 381 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 ELP6Q0PNE2 266 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 BIRC2Q13490 618 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 RAPGEF1Q13905 1077 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 MEA1Q16626 185 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 ZCWPW2Q504Y3 356 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 PRR30Q53SZ7 412 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 ZRANB3Q5FWF4 1079 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 DCAF17Q5H9S7 520 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 BRMS1LQ5PSV4 323 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 ACBD5Q5T8D3 534 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 TCERG1LQ5VWI1 586 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 RESP18Q5W5W9 173 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 PAPD7Q5XG87 772 aaKnown RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 SP5Q6BEB4 398 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 NRROSQ86YC3 692 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 GUF1Q8N442 669 aaKnown RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 PLA2G15Q8NCC3 412 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 DNAJB8Q8NHS0 232 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 GPT2Q8TD30 523 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 ARHGEF2Q92974 986 aaKnown RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 KAT5Q92993 513 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 HMCESQ96FZ2 354 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 DPH2Q9BQC3 489 aaPredicted RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 SLC25A23Q9BV35 468 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 TRIM55Q9BYV6 548 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 APMAPQ9HDC9 416 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 TAAR2Q9P1P5 351 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 CROTQ9UKG9 612 aa6.84□□□□□ -1.31
ATXN3-236ENST00000556220 PCDHGA9Q9Y5G4 932 aaKnown RBP6.84□□□□□ -1.31
ATXN3-236ENST00000556220 PIPSLA2A3N6 862 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 A8MU76 341 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 POLR1CO15160 346 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 PMM2O15305 246 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 SRGAP2O75044 1071 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 KATNA1O75449 491 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 CREG1O75629 220 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 F13A1P00488 732 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 KRT1P04264 644 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 XPAP23025 273 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 CXCR3P49682 368 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 ST13P50502 369 aaKnown RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 RAD51Q06609 339 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 RALGPS1Q5JS13 557 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 SNAP47Q5SQN1 464 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 ATXN7L2Q5T6C5 722 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 ANKRD40Q6AI12 368 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 JMJD6Q6NYC1 403 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 C6orf15Q6UXA7 325 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-236ENST00000556220 MCEMP1Q8IX19 187 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 NAGSQ8N159 534 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 PPM1KQ8N3J5 372 aa6.83□□□□□ -1.32
ATXN3-236ENST00000556220 Q8NA96 180 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms