RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CAPN14A8MX76 684 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 K7ERQ8 282 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 GRM6O15303 877 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 STX7O15400 261 aaKnown RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 NDUFS3O75489 264 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 LYPLA1O75608 230 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 HSPA4LO95757 839 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 IGSF6O95976 241 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 RHOP08100 348 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 F7P08709 466 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CCDC166P0CW27 439 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 GJA1P17302 382 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 TFEBP19484 476 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CALB2P22676 271 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 PTPN4P29074 926 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CD70P32970 193 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 NUMBP49757 651 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 RPL14P50914 215 aaKnown RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CDKN2DP55273 166 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 NAA20P61599 178 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 ELF3P78545 371 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 NFKB2Q00653 900 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 TIAL1Q01085 375 aaKnown RBP eCLIP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 SEMA3AQ14563 771 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 PTPRCAPQ14761 206 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 TEAD2Q15562 447 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CDKN3Q16667 212 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 TECRLQ5HYJ1 363 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 COX20Q5RI15 118 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CERS6Q6ZMG9 384 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 ATG14Q6ZNE5 492 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 ISCA2Q86U28 154 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 SLC22A9Q8IVM8 553 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 STK40Q8N2I9 435 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 LPCAT1Q8NF37 534 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 RHEBL1Q8TAI7 183 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 GRIN3AQ8TCU5 1115 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 MICAL1Q8TDZ2 1067 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 WFDC12Q8WWY7 111 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 EXOC2Q96KP1 924 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF641Q96N77 438 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 NDNQ99608 321 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 C17orf80Q9BSJ5 609 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 TRMOQ9BU70 441 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 SMG9Q9H0W8 520 aaKnown RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CDH19Q9H159 772 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 TFB2MQ9H5Q4 396 aaKnown RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 ATP13A3Q9H7F0 1226 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 KLC4Q9NSK0 619 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 PNPOQ9NVS9 261 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 HCFC1R1Q9NWW0 138 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 NCKIPSDQ9NZQ3 722 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 IL17CQ9P0M4 197 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CPSF2Q9P2I0 782 aaKnown RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 XPR1Q9UBH6 696 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 INTS6Q9UL03 887 aaKnown RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 CLEC4EQ9ULY5 219 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 OAS3Q9Y6K5 1087 aaKnown RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 NUMBLQ9Y6R0 609 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 PTPRSQ13332 1948 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 A0A0J9YYE9 177 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 OR51F1A6NGY5 319 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 F8W8V4 182 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 MATN2O00339 956 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CCL22O00626 93 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 SLC22A2O15244 555 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 HDAC3O15379 428 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 SMAD6O43541 496 aaKnown RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 RFPL2O75678 378 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 IPO13O94829 963 aaKnown RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 POP4O95707 220 aaKnown RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 TRBC1P01850 177 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 PYGLP06737 847 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 PIRTP0C851 137 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 HSPA1AP0DMV8 641 aaKnown RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 HSPA1BP0DMV9 641 aaKnown RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 SRCP12931 536 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CD1DP15813 335 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 AOC1P19801 751 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 IMPDH1P20839 514 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ADSLP30566 484 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 SLC8A1P32418 973 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 PTGER3P43115 390 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 NAGLUP54802 743 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ATP6V0D1P61421 351 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ERVK-21P61565 698 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 SNRPD1P62314 119 aaKnown RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 KCNJ2P63252 427 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 XIAPP98170 497 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CACNG1Q06432 222 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 BCL2L1Q07817 233 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 CSHL1Q14406 222 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF460Q14592 562 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF77Q15935 545 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 MYLK3Q32MK0 819 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 TTC31Q49AM3 519 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ARL13AQ5H913 290 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-235ENST00000556082 PITRM1Q5JRX3 1037 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 DGKKQ5KSL6 1271 aa8.25□□□□□ -1.09
ATXN3-235ENST00000556082 ATXN7L2Q5T6C5 722 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms