RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 HSF4Q9ULV5 492 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 ERVK-11Q9UQG0 969 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 CEPT1Q9Y6K0 416 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 TRIOBPQ9H2D6 2365 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 hCG_1642624A0A1W2PR95 340 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 SPINT2O43291 252 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 TSHBP01222 138 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 MAP2K2P36507 400 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 GPD2P43304 727 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 FASLGP48023 281 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 PAPOLAP51003 745 aaKnown RBP2.71□□□□□ -1.98
SRP54-207ENST00000555535 CDH15P55291 814 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 CLDN20P56880 219 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 TAS2R38P59533 333 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 COG7P83436 770 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 FOXM1Q08050 763 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 TBX2Q13207 712 aaPredicted RBP2.71□□□□□ -1.98
SRP54-207ENST00000555535 EFR3AQ14156 821 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 FBXO47Q5MNV8 452 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 MAP3K21Q5TCX8 1036 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 FRG2Q64ET8 278 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 C18orf63Q68DL7 685 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 ZNF613Q6PF04 617 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 PQLC2Q6ZP29 291 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 RBM15BQ8NDT2 890 aaKnown RBP2.71□□□□□ -1.98
SRP54-207ENST00000555535 DDHD1Q8NEL9 900 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 SLC44A1Q8WWI5 657 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 MPHOSPH8Q99549 860 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 DLGAP2Q9P1A6 1054 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 CACNG5Q9UF02 275 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 KLHL20Q9Y2M5 609 aa2.71□□□□□ -1.98
SRP54-207ENST00000555535 VCYO14598 125 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 NCAM2O15394 837 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 EDN1P05305 212 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 DUX4L4P0CJ87 422 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 AHRP35869 848 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 CCR5P51681 352 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 MLLT10P55197 1068 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 ARL4CP56559 192 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 TUBB2AQ13885 445 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 NFIL3Q16649 462 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 DECR1Q16698 335 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 ATG16L1Q676U5 607 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 SLC22A25Q6T423 547 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 ZNF704Q6ZNC4 412 aaPredicted RBP2.7□□□□□ -1.98
SRP54-207ENST00000555535 ATG9AQ7Z3C6 839 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 PIWIL4Q7Z3Z4 852 aaKnown RBP2.7□□□□□ -1.98
SRP54-207ENST00000555535 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.7□□□□□ -1.98
SRP54-207ENST00000555535 MAP7D3Q8IWC1 876 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 C11orf53Q8IXP5 236 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 APBB2Q92870 758 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 ZSCAN31Q96LW9 406 aaPredicted RBP2.7□□□□□ -1.98
SRP54-207ENST00000555535 IWS1Q96ST2 819 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 SYT11Q9BT88 431 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 TUBB2BQ9BVA1 445 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 INTS2Q9H0H0 1204 aaKnown RBP2.7□□□□□ -1.98
SRP54-207ENST00000555535 BICC1Q9H694 974 aaKnown RBP2.7□□□□□ -1.98
SRP54-207ENST00000555535 ACSS1Q9NUB1 689 aaPredicted RBP2.7□□□□□ -1.98
SRP54-207ENST00000555535 TMEM181Q9P2C4 612 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 MARCH4Q9P2E8 410 aaPredicted RBP2.7□□□□□ -1.98
SRP54-207ENST00000555535 ACAD8Q9UKU7 415 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 A4GNTQ9UNA3 340 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 SCINQ9Y6U3 715 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 ATRXP46100 2492 aa2.7□□□□□ -1.98
SRP54-207ENST00000555535 DUXAA6NLW8 204 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 IRAK2O43187 625 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 TYMPP19971 482 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 APOBEC1P41238 236 aaKnown RBP2.69□□□□□ -1.98
SRP54-207ENST00000555535 GRK6P43250 576 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 UFM1P61960 85 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 PLIN5Q00G26 463 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 PDCD2Q16342 344 aaPredicted RBP2.69□□□□□ -1.98
SRP54-207ENST00000555535 COL28A1Q2UY09 1125 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 SNAI3Q3KNW1 292 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 SIGIRRQ6IA17 410 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 ZNF343Q6P1L6 599 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 PPHLN1Q8NEY8 458 aaKnown RBP2.69□□□□□ -1.98
SRP54-207ENST00000555535 THAP6Q8TBB0 222 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 PYM1Q9BRP8 204 aaKnown RBP2.69□□□□□ -1.98
SRP54-207ENST00000555535 TCP11L1Q9NUJ3 509 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 INTS10Q9NVR2 710 aaKnown RBP2.69□□□□□ -1.98
SRP54-207ENST00000555535 ADPRHL2Q9NX46 363 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 HCN3Q9P1Z3 774 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 SLC25A10Q9UBX3 287 aaPredicted RBP2.69□□□□□ -1.98
SRP54-207ENST00000555535 FBXL2Q9UKC9 423 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 MRPS28Q9Y2Q9 187 aaKnown RBP2.69□□□□□ -1.98
SRP54-207ENST00000555535 PYGO1Q9Y3Y4 419 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 SMCHD1A6NHR9 2005 aa2.69□□□□□ -1.98
SRP54-207ENST00000555535 TEX13CA0A0J9YWL9 993 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 A0A1W2PP11 408 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 A0A1W2PPI3 338 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 OR5K3A6NET4 321 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 GAGE10A6NGK3 116 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 LDLRAD4O15165 306 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 SLC22A2O15244 555 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 WISP2O76076 250 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 MLYCDO95822 493 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 IRF1P10914 325 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 CEACAM1P13688 526 aa2.68□□□□□ -1.98
SRP54-207ENST00000555535 CSF2RAP15509 400 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms