RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	RMDN1	Q96DB5	314 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	URB1-AS1	Q96HZ7	61 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CDRT15	Q96T59	188 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	SEBOX	Q9HB31	216 aa	Predicted RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	GDE1	Q9NZC3	331 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	CRNN	Q9UBG3	495 aa	Predicted RBP	4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	AMACR	Q9UHK6	382 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	SQOR	Q9Y6N5	450 aa		4.37	□□□□□ -1.71
KTN1-222	ENST00000555506	LY6G6E	A0A0G2JKS1	128 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	EIF4E1B	A6NMX2	242 aa	Known RBP	4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	ASAP2	O43150	1006 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	QDPR	P09417	244 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	STX2	P32856	288 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	IL11RA	Q14626	422 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	PRTG	Q2VWP7	1150 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	FSCB	Q5H9T9	825 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	PXDC1	Q5TGL8	231 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	FRG2	Q64ET8	278 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	DUS1L	Q6P1R4	473 aa	Known RBP	4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	KCTD18	Q6PI47	426 aa	Predicted RBP	4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	SLC36A4	Q6YBV0	504 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	CCDC190	Q86UF4	302 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	ZC3HC1	Q86WB0	502 aa	Known RBP	4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	FOXRED2	Q8IWF2	684 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	OR6J1	Q8NGC5	347 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	GRAMD2B	Q96HH9	432 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	TMEM39B	Q9GZU3	492 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	ANKRD2	Q9GZV1	360 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	SPRTN	Q9H040	489 aa	Predicted RBP	4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	SPATC1L	Q9H0A9	340 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	SLCO5A1	Q9H2Y9	848 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	KCNK15	Q9H427	330 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	HACL1	Q9UJ83	578 aa		4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	DBNL	Q9UJU6	430 aa	Known RBP	4.36	□□□□□ -1.71
KTN1-222	ENST00000555506	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	TMEM8B	A6NDV4	472 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	URAD	A6NGE7	173 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	MAGEB17	A8MXT2	336 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506		B4DGG1	531 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	CLGN	O14967	610 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	SPINT2	O43291	252 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	KCNK5	O95279	499 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	CCDC175	P0C221	793 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	SCG2	P13521	617 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	RPL3	P39023	403 aa	Known RBP	4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	FASLG	P48023	281 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	CCR3	P51677	355 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	NUDT6	P53370	316 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	FOXM1	Q08050	763 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	MAD2L1	Q13257	205 aa	Predicted RBP	4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	FNBP1L	Q5T0N5	605 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	DCST1	Q5T197	706 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	HECTD3	Q5T447	861 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	NSUN5P2	Q63ZY6	315 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	LCN10	Q6JVE6	187 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	CHST3	Q7LGC8	479 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	CCDC186	Q7Z3E2	898 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	HAUS6	Q7Z4H7	955 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	BEST3	Q8N1M1	668 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506		Q8NFD4	153 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	ADAMTS14	Q8WXS8	1223 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	ORAI1	Q96D31	301 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	SPATA17	Q96L03	361 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	TTC14	Q96N46	770 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	KXD1	Q9BQD3	176 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	FAM234A	Q9H0X4	552 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	C17orf75	Q9HAS0	396 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	TINAG	Q9UJW2	476 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	OSGIN1	Q9UJX0	560 aa		4.35	□□□□□ -1.71
KTN1-222	ENST00000555506	IGHV4-28	A0A0C4DH34	117 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	RGS14	O43566	566 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	SPRY3	O43610	288 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	NDUFS7	O75251	213 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	MOSPD3	O75425	235 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	BCL10	O95999	233 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	TMEM191B	P0C7N4	346 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	VPREB1	P12018	145 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	BDKRB2	P30411	391 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	MATR3	P43243	847 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	RFX2	P48378	723 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	MXI1	P50539	228 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	TERF1	P54274	439 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	SIRPA	P78324	504 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	PPAT	Q06203	517 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	TFCP2	Q12800	502 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	KRT33B	Q14525	404 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	RABEP1	Q15276	862 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	DECR1	Q16698	335 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	MYLK3	Q32MK0	819 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	C1QTNF12	Q5T7M4	302 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	CST9LP1	Q5W188	147 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	IL27RA	Q6UWB1	636 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	FAM47E	Q6ZV65	393 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	GALNTL5	Q7Z4T8	443 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	LDB1	Q86U70	411 aa	Predicted RBP	4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	NRROS	Q86YC3	692 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	GALNT13	Q8IUC8	556 aa		4.34	□□□□□ -1.71
KTN1-222	ENST00000555506	RASGEF1C	Q8N431	466 aa		4.34	□□□□□ -1.71

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