RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 IRX4P78413 519 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 DUOXA1Q1HG43 343 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 BBS9Q3SYG4 887 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 PRAMEF14Q5SWL7 426 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 FBXW10Q5XX13 1052 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 NEK5Q6P3R8 708 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 LYSMD3Q7Z3D4 306 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 HSD11B1LQ7Z5J1 315 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 KIAA2013Q8IYS2 634 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 MZB1Q8WU39 189 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 DCAKDQ8WVC6 231 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 TADA1Q96BN2 335 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 TRIB3Q96RU7 358 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 TBL1YQ9BQ87 522 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 ORAI3Q9BRQ5 295 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 WDR83Q9BRX9 315 aaKnown RBP9.83□□□□□ -0.84
PSEN1-213ENST00000555386 GPR63Q9BZJ6 419 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 BPIFA1Q9NP55 256 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 MBNL1Q9NR56 388 aaKnown RBP9.83□□□□□ -0.84
PSEN1-213ENST00000555386 VPS45Q9NRW7 570 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 KLC4Q9NSK0 619 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 SEMA4GQ9NTN9 838 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 SPO11Q9Y5K1 396 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 ZNF292O60281 2723 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 ASCC3Q8N3C0 2202 aaKnown RBP9.83□□□□□ -0.84
PSEN1-213ENST00000555386 PIEZO1Q92508 2521 aa9.83□□□□□ -0.84
PSEN1-213ENST00000555386 A0A1B0GTW7 788 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 TCRBV7S3A2A0A539 114 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 CCDC78A2IDD5 438 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 POM121BA6NF01 834 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 FOXO6A8MYZ6 492 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 AURKAO14965 403 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 WNT1P04628 370 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 APRTP07741 180 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 ATXN1LP0C7T5 689 aaKnown RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 TPSB2P20231 275 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 FOXN2P32314 431 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 ELK3P41970 407 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 AFF3P51826 1226 aaKnown RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 C21orf59P57076 290 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 RPL26P61254 145 aaKnown RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 BNIP1Q12981 228 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 MTM1Q13496 603 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 IRF4Q15306 451 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 TEAD4Q15561 434 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 TPSAB1Q15661 275 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 SLC1A5Q15758 541 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 SPRED3Q2MJR0 410 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 AASDHQ4L235 1098 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 SPDYAQ5MJ70 313 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 HP1BP3Q5SSJ5 553 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 HHATQ5VTY9 493 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 NAPEPLDQ6IQ20 393 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 Q6ZVL8 140 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 ZNF398Q8TD17 642 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 MAGEC3Q8TD91 643 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 LRRC8CQ8TDW0 803 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 SLC44A1Q8WWI5 657 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 NUS1Q96E22 293 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 MCCC1Q96RQ3 725 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 C1QTNF7Q9BXJ2 289 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 C1QTNF2Q9BXJ5 285 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 NUSAP1Q9BXS6 441 aaKnown RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 VPS11Q9H270 941 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 SUDS3Q9H7L9 328 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 CAAP1Q9H8G2 361 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 MLXIPLQ9NP71 852 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 RXFP3Q9NSD7 469 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 SUSD2Q9UGT4 822 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 ZNF180Q9UJW8 692 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 RPL26L1Q9UNX3 145 aaKnown RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 ZNF711Q9Y462 761 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 PCDHGA5Q9Y5G8 931 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 IKBKGQ9Y6K9 419 aa9.82□□□□□ -0.84
PSEN1-213ENST00000555386 GOLGA4Q13439 2230 aaKnown RBP9.82□□□□□ -0.84
PSEN1-213ENST00000555386 BPTFQ12830 3046 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 LOC285095A0A1B0GVY8 99 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 TCRBV9S1A1TA0A576 114 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 FPGTO14772 594 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 GDF9O60383 454 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 EDF1O60869 148 aaKnown RBP9.81□□□□□ -0.84
PSEN1-213ENST00000555386 SPAG7O75391 227 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 BANF1O75531 89 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 ATP5HO75947 161 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 C1SP09871 688 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 KRT4P19013 534 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CD38P28907 300 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 ALDH3A1P30838 453 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 RPA3P35244 121 aaPredicted RBP9.81□□□□□ -0.84
PSEN1-213ENST00000555386 IGFALSP35858 605 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 FDFT1P37268 417 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 PLA2G5P39877 138 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 MAGEA3P43357 314 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 ATXN3P54252 364 aaPredicted RBP9.81□□□□□ -0.84
PSEN1-213ENST00000555386 RACK1P63244 317 aaKnown RBP9.81□□□□□ -0.84
PSEN1-213ENST00000555386 CDK16Q00536 496 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 PTSQ03393 145 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 SLC18A2Q05940 514 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 SEPT6Q14141 434 aa9.81□□□□□ -0.84
PSEN1-213ENST00000555386 PTPRCAPQ14761 206 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms