RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CERS6Q6ZMG9 384 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 MACC1Q6ZN28 852 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 UNC5AQ6ZN44 842 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 PTAR1Q7Z6K3 402 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 LMNTD2Q8IXW0 634 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 PIANPQ8IYJ0 282 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 ZBED8Q8IZ13 594 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 GPR161Q8N6U8 529 aaKnown RBP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 FBXO36Q8NEA4 188 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 PYROXD1Q8WU10 500 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 HEXDCQ8WVB3 486 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 UBXN4Q92575 508 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 PHOX2BQ99453 314 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 FMO2Q99518 471 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 NUSAP1Q9BXS6 441 aaKnown RBP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 MOCS1Q9NZB8 636 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 VPS18Q9P253 973 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 ZC3H7BQ9UGR2 993 aaKnown RBP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 DGKBQ9Y6T7 804 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 DMDP11532 3685 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 GPR179Q6PRD1 2367 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 SCN8AQ9UQD0 1980 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 IGLV3-16A0A075B6K0 115 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 OR51F1A6NGY5 319 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 INPP4BO15327 924 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 CD3EAPO15446 510 aaKnown RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 VEGFDO43915 354 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 FOXD2O60548 495 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 FUCA1P04066 466 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 CSF2P04141 144 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 GSTA2P09210 222 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 ACRV1P26436 265 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 MAGEA4P43358 317 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 CDKN1CP49918 316 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 TMEM115Q12893 351 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 EIF2B5Q13144 721 aaKnown RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 CRYMQ14894 314 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 LONRF1Q17RB8 773 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 ZNF423Q2M1K9 1284 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 FASTKD1Q53R41 847 aaKnown RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 ZRANB3Q5FWF4 1079 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 HP1BP3Q5SSJ5 553 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 LYPLAL1Q5VWZ2 237 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 PSAPL1Q6NUJ1 521 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 WDR93Q6P2C0 686 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 ENPP7Q6UWV6 458 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 CCNI2Q6ZMN8 369 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 ADGRG6Q86SQ4 1221 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 PARGQ86W56 976 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 PHYKPLQ8IUZ5 450 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 NXPE1Q8N323 547 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 OXR1Q8N573 874 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 OR56A4Q8NGH8 313 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 OR6P1Q8NGX9 317 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 ZNF669Q96BR6 464 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 WDR92Q96MX6 357 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 RMI1Q9H9A7 625 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 SAYSD1Q9NPB0 183 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 SEMA4GQ9NTN9 838 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 NCDNQ9UBB6 729 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 RAPGEFL1Q9UHV5 662 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 PNMA8BQ9ULN7 279 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 NFU1Q9UMS0 254 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 CHMP2BQ9UQN3 213 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 FNDC3AQ9Y2H6 1198 aaKnown RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 SNX11Q9Y5W9 270 aa12.56□□□□□ -0.4
SYNE2-219ENST00000555323 OAS3Q9Y6K5 1087 aaKnown RBP12.56□□□□□ -0.4
SYNE2-219ENST00000555323 CHUKO15111 745 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 GPR39O43194 453 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 NUAK1O60285 661 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 DNAJC6O75061 913 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 CFIP05156 583 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 IVLP07476 585 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 NME1P15531 152 aaKnown RBP12.55□□□□□ -0.4
SYNE2-219ENST00000555323 BLKP51451 505 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 SRP54P61011 504 aaKnown RBP12.55□□□□□ -0.4
SYNE2-219ENST00000555323 GRIK2Q13002 908 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 ITIH4Q14624 930 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 ERCC6LQ2NKX8 1250 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 TYSND1Q2T9J0 566 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 KHDC1Q4VXA5 237 aaKnown RBP12.55□□□□□ -0.4
SYNE2-219ENST00000555323 NEPROQ6NW34 567 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 ZNF449Q6P9G9 518 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 C3orf62Q6ZUJ4 267 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 ASCL5Q7RTU5 278 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 SERPINA9Q86WD7 417 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 ANKMY2Q8IV38 441 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 CNTN4Q8IWV2 1026 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 PALM2Q8IXS6 379 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 GSDMBQ8TAX9 411 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 TCF12Q99081 682 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 ELF4Q99607 663 aaPredicted RBP12.55□□□□□ -0.4
SYNE2-219ENST00000555323 TTC1Q99614 292 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 FAM96AQ9H5X1 160 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 LRRC4CQ9HCJ2 640 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 CATSPERZQ9NTU4 200 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 ZDHHC3Q9NYG2 299 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 ATXN10Q9UBB4 475 aa12.55□□□□□ -0.4
SYNE2-219ENST00000555323 KLF15Q9UIH9 416 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms