RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 LPAR1Q92633 364 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 USP6NLQ92738 828 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SNAPC3Q92966 411 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ARHGEF2Q92974 986 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 GTF3C6Q969F1 213 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PABPC5Q96DU9 382 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 NLRP4Q96MN2 994 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MXRA8Q9BRK3 442 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SDF4Q9BRK5 362 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MSTO1Q9BUK6 570 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 STRA6Q9BX79 667 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 HIPK2Q9H2X6 1198 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 PLEKHA4Q9H4M7 779 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 BPIFA1Q9NP55 256 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ASAH2Q9NR71 780 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SMYD2Q9NRG4 433 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SEPT11Q9NVA2 429 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SWAP70Q9UH65 585 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 SLCO3A1Q9UIG8 710 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 MKLN1Q9UL63 735 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 LSM4Q9Y4Z0 139 aaKnown RBP1.57□□□□□ -2.16
PRPF39-208ENST00000554785 LYVE1Q9Y5Y7 322 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 A3GALT2U3KPV4 340 aa1.57□□□□□ -2.16
PRPF39-208ENST00000554785 ASTN2O75129 1339 aaPredicted RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 RAB3GAP2Q9H2M9 1393 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 NCOR1O75376 2440 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 MUC6Q6W4X9 2439 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 SPEGQ15772 3267 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 A0A0U1RQF3 1178 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 LIPT2A6NK58 231 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 PRSS47A8MTI9 375 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ERVV-2B6SEH9 535 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 MS4A18H0YCH9 400 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 AP3D1O14617 1153 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 BCAT2O15382 392 aaPredicted RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 PPIP5K2O43314 1243 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 KLK8O60259 260 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 HNRNPCL1O60812 293 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 PAGE4O60829 102 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 RGS11O94810 467 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 CYP1A2P05177 515 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 EIF2S1P05198 315 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ETFAP13804 333 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ARSBP15848 533 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 CDH2P19022 906 aaPredicted RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ITGAXP20702 1163 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 MYF6P23409 242 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 BDNFP23560 247 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ARRB2P32121 409 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 SHMT1P34896 483 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 MAP2K2P36507 400 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 CDKN2AP42771 156 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 DRG2P55039 364 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 P2RX3P56373 397 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ZP1P60852 638 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 OLIG2Q13516 323 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 GPR18Q14330 331 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 FGFBP1Q14512 234 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 TCTN1Q2MV58 587 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ALG11Q2TAA5 492 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 SPATA1Q5VX52 437 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 TTI2Q6NXR4 508 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 NCEH1Q6PIU2 408 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 CYP20A1Q6UW02 462 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 IKBIPQ70UQ0 350 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 TRILQ7L0X0 811 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 FASTKD5Q7L8L6 764 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 PATL1Q86TB9 770 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 NOXA1Q86UR1 476 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 MB21D2Q8IYB1 491 aaPredicted RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 DEFB123Q8N688 67 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 C7orf57Q8NEG2 295 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 CREB3L4Q8TEY5 395 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 POMGNT1Q8WZA1 660 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 FBXL8Q96CD0 374 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 LYZL4Q96KX0 146 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF570Q96NI8 536 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 TMX4Q9H1E5 349 aaPredicted RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 GHITMQ9H3K2 345 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 CATSPERBQ9H7T0 1116 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 KIF9Q9HAQ2 790 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 SCPEP1Q9HB40 452 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 MAGEE1Q9HCI5 957 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 FBRSL1Q9HCM7 1045 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 KRCC1Q9NPI7 259 aaPredicted RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 CYSLTR2Q9NS75 346 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 SLC6A13Q9NSD5 602 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 HCFC1R1Q9NWW0 138 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 TERF2IPQ9NYB0 399 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 PLK2Q9NYY3 685 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 DLGAP2Q9P1A6 1054 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 CORO1CQ9ULV4 474 aaPredicted RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 AAR2Q9Y312 384 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ADAM18Q9Y3Q7 739 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 SRPRBQ9Y5M8 271 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 RAI2Q9Y5P3 530 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 ALPK3Q96L96 1907 aa1.56□□□□□ -2.16
PRPF39-208ENST00000554785 EDC4Q6P2E9 1401 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 RBBP6Q7Z6E9 1792 aaKnown RBP1.56□□□□□ -2.16
PRPF39-208ENST00000554785 A0A1W2PQF6 199 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms