RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SLC47A2Q86VL8 602 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 CREBRFQ8IUR6 639 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 FAM71AQ8IYT1 594 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 CHPFQ8IZ52 775 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TMEM132CQ8N3T6 1108 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 FRMD1Q8N878 549 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 C1orf131Q8NDD1 294 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TBC1D15Q8TC07 691 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 WFDC5Q8TCV5 224 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 WFIKKN2Q8TEU8 576 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 IPO4Q8TEX9 1081 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 RNF139Q8WU17 664 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 HMGB4Q8WW32 186 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 RLN3Q8WXF3 142 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 SORCS1Q8WY21 1168 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 JADE3Q92613 823 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TCEAL3Q969E4 200 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 AZIN2Q96A70 460 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ERLEC1Q96DZ1 483 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 FAM81BQ96LP2 452 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 SERPINB11Q96P15 392 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 CPXM1Q96SM3 734 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TUBGCP2Q9BSJ2 902 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 NAA15Q9BXJ9 866 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 MIS12Q9H081 205 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 GANQ9H2C0 597 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ARRDC1-AS1Q9H2J1 176 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 NDST4Q9H3R1 872 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 GSTO2Q9H4Y5 243 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 VPS45Q9NRW7 570 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 RXFP3Q9NSD7 469 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ASNSD1Q9NWL6 643 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 ELOVL2Q9NXB9 296 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TAB2Q9NYJ8 693 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 CALCOCO1Q9P1Z2 691 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 BCCIPQ9P287 314 aaKnown RBP eCLIP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 THAP10Q9P2Z0 257 aaPredicted RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 XPO7Q9UIA9 1087 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TUBD1Q9UJT1 453 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 DNAJC12Q9UKB3 198 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TRHDEQ9UKU6 1024 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 MTO1Q9Y2Z2 717 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 NFE2L3Q9Y4A8 694 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 PCDHA13Q9Y5I0 950 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 STON1Q9Y6Q2 735 aa4.28□□□□□ -1.72
VTI1B-203ENST00000554636 TPRP12270 2363 aaKnown RBP4.28□□□□□ -1.72
VTI1B-203ENST00000554636 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 WASH3PC4AMC7 463 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 F8VZ95 297 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 NPC1O15118 1278 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 EPHB6O15197 1021 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 TEX33O43247 280 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 TSPAN3O60637 253 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 TBL1XO60907 577 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 DAB1O75553 588 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CAVIN2O95810 425 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 GPANK1O95872 356 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 TRUB2O95900 331 aaKnown RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 UCHL3P15374 230 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CYP11B1P15538 503 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF18P17022 549 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 C5AR1P21730 350 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CD70P32970 193 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 USP8P40818 1118 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 PTGER3P43115 390 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 KLK7P49862 253 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CDKN1CP49918 316 aaPredicted RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 COPAP53621 1224 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 RPS24P62847 133 aaKnown RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 NOMO3P69849 1222 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CXADRP78310 365 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CREB5Q02930 508 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 LMAN2Q12907 356 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF234Q14588 700 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 DRAP1Q14919 205 aaPredicted RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 KRT31Q15323 416 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 TAF5Q15542 800 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 ELF2Q15723 593 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 FUT11Q495W5 492 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 DCAF6Q58WW2 860 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 MS4A13Q5J8X5 152 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 MPP7Q5T2T1 576 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CCDC183Q5T5S1 534 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 KLHDC7AQ5VTJ3 777 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 SYPL2Q5VXT5 272 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 RFWD3Q6PCD5 774 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 OLFML1Q6UWY5 402 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CHST9Q7L1S5 443 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 APTXQ7Z2E3 356 aaKnown RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 DGLUCYQ7Z3D6 616 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 ADIPOR2Q86V24 386 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 UNC45BQ8IWX7 931 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 DEFB106AQ8N104 65 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CBARPQ8N350 705 aaPredicted RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 DCBLD1Q8N8Z6 715 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 C1orf162Q8NEQ5 155 aaPredicted RBP4.27□□□□□ -1.73
VTI1B-203ENST00000554636 DDI1Q8WTU0 396 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 CASKIN2Q8WXE0 1202 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 GOLGA1Q92805 767 aa4.27□□□□□ -1.73
VTI1B-203ENST00000554636 FAM149B1Q96BN6 582 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms