RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SERPINB11Q96P15 392 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TMEM209Q96SK2 561 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RACGAP1Q9H0H5 632 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 VCXQ9H320 206 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 TRIT1Q9H3H1 467 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 RABEP2Q9H5N1 569 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 CATSPERBQ9H7T0 1116 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ALG13Q9NP73 1137 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SPAG4Q9NPE6 437 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SCUBE2Q9NQ36 999 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 THSD1Q9NS62 852 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF275Q9NSD4 429 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 SPATA6Q9NWH7 488 aaPredicted RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 NDRG4Q9ULP0 352 aaKnown RBP3.43□□□□□ -1.86
SEC23A-207ENST00000554615 USP22Q9UPT9 525 aa3.43□□□□□ -1.86
SEC23A-207ENST00000554615 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CLDN24A6NM45 220 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PDHXO00330 501 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CLGNO14967 610 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SOCS5O75159 536 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 COQ9O75208 318 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CHRNGP07510 517 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 UROSP10746 265 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NCF1P14598 390 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 FOSL2P15408 326 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TGM1P22735 817 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ADCYAP1R1P41586 468 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ISL1P61371 349 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 YWHAGP61981 247 aaKnown RBP eCLIP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ACSM1Q08AH1 577 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ORC1Q13415 861 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TCTN1Q2MV58 587 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TBC1D10BQ4KMP7 808 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 HECTD2Q5U5R9 776 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CST9Q5W186 159 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 FRMPD2BQ6IN97 320 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CYP4F22Q6NT55 531 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 BHLHB9Q6PI77 547 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF773Q6PK81 442 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SLC30A9Q6PML9 568 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF551Q7Z340 670 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 DDX53Q86TM3 631 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PNMA8AQ86V59 439 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MON1AQ86VX9 555 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CLYBLQ8N0X4 340 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ANKRD42Q8N9B4 389 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 WDR20Q8TBZ3 569 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PROKR1Q8TCW9 393 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CASP10Q92851 521 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MYLPFQ96A32 169 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 LENG1Q96BZ8 264 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 COQ8BQ96D53 544 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 EID2BQ96D98 161 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SENP8Q96LD8 212 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 HEXIM2Q96MH2 286 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CSF3RQ99062 836 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SLC30A3Q99726 388 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 FAM118BQ9BPY3 351 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MTG1Q9BT17 334 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MENTQ9BUN1 341 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MROQ9BYG7 248 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GRIP2Q9C0E4 1043 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NT5DC2Q9H857 520 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CARS2Q9HA77 564 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NMUR1Q9HB89 426 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ISYNA1Q9NPH2 558 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GNPTGQ9UJJ9 305 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 A0A0J9YVX5 310 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 FAM95CA0A1B0GW59 222 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 C17orf102A2RUQ5 167 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 POC1B-GALNT4F8VUJ3 575 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 J3QRE1 110 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SOCS2O14508 198 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PMPCBO75439 489 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 KATNA1O75449 491 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 TP53P04637 393 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CCDC159P0C7I6 412 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 MBL2P11226 248 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 HSD3B1P14060 373 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CPB1P15086 417 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GALP22466 123 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 HSD3B2P26439 372 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PCSK1P29120 753 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GSTT1P30711 240 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 CD151P48509 253 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 RGS7P49802 495 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NDUFV1P49821 464 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 SLC7A2P52569 658 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NME5P56597 212 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 PCBP3P57721 371 aaKnown RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ERVK-8P63133 956 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 LRRC74AQ0VAA2 488 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GPR17Q13304 367 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ENPP2Q13822 863 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 NADK2Q4G0N4 442 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 RNF220Q5VTB9 566 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 GDF6Q6KF10 455 aaPredicted RBP3.42□□□□□ -1.86
SEC23A-207ENST00000554615 ARHGAP36Q6ZRI8 547 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 FAM47EQ6ZV65 393 aa3.42□□□□□ -1.86
SEC23A-207ENST00000554615 STRA8Q7Z7C7 330 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms