RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 MYF5P13349 255 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 CCNB1P14635 433 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 CCNCP24863 283 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 VIPR1P32241 457 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 LSP1P33241 339 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 HK3P52790 923 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 CYP4F3Q08477 520 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 TRAF2Q12933 501 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 TARDBPQ13148 414 aaKnown RBP eCLIP12.4□□□□□ -0.42
SHMT2-214ENST00000554604 ARHGEF7Q14155 803 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 NFATC4Q14934 902 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 HIF1AQ16665 826 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 ZSCAN26Q16670 478 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 USP45Q70EL2 814 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 BZW1Q7L1Q6 419 aaKnown RBP12.4□□□□□ -0.42
SHMT2-214ENST00000554604 TAOK1Q7L7X3 1001 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 ZC3H18Q86VM9 953 aaKnown RBP12.4□□□□□ -0.42
SHMT2-214ENST00000554604 PROSER1Q86XN7 944 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 NDUFAF2Q8N183 169 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 FSTL5Q8N475 847 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-214ENST00000554604 TEX26Q8N6G2 289 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 LRRN4Q8WUT4 740 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 SCG3Q8WXD2 468 aaKnown RBP12.4□□□□□ -0.42
SHMT2-214ENST00000554604 SPOCK2Q92563 424 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 TSACCQ96A04 125 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-214ENST00000554604 C9orf72Q96LT7 481 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 TBATAQ96M53 351 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 WDR92Q96MX6 357 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 LRRC61Q9BV99 259 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 C10orf88Q9H8K7 445 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 RBM22Q9NW64 420 aaKnown RBP eCLIP12.4□□□□□ -0.421e-9■■■■□ 20
SHMT2-214ENST00000554604 KLQ9UEF7 1012 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 CLCA2Q9UQC9 943 aa12.4□□□□□ -0.42
SHMT2-214ENST00000554604 KIF26BQ2KJY2 2108 aa12.4□□□□□ -0.43
SHMT2-214ENST00000554604 ZFC3H1O60293 1989 aaKnown RBP12.39□□□□□ -0.43
SHMT2-214ENST00000554604 CPED1A4D0V7 1026 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 E7EVH7 732 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 KCNN4O15554 427 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 CDH16O75309 829 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 GCATO75600 419 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 PGLSO95336 258 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 GP1BAP07359 652 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 ALPIP09923 528 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 CA4P22748 312 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 CES1P23141 567 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 KELP23276 732 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 MAGEA6P43360 314 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 RPIAP49247 311 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 EPHB1P54762 984 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 SRP54P61011 504 aaKnown RBP12.39□□□□□ -0.43
SHMT2-214ENST00000554604 INSM1Q01101 510 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-214ENST00000554604 GUCY1A3Q02108 690 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 GBE1Q04446 702 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 PDIA2Q13087 525 aaKnown RBP12.39□□□□□ -0.43
SHMT2-214ENST00000554604 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 RASA2Q15283 850 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 ELOCQ15369 112 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 TCEA2Q15560 299 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 CDKN3Q16667 212 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 LONRF1Q17RB8 773 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 ALG11Q2TAA5 492 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 ANKRD22Q5VYY1 191 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 TDRPQ86YL5 185 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 PLA2G15Q8NCC3 412 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 NXPE2Q96DL1 559 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 NUS1Q96E22 293 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 TSGA13Q96PP4 275 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 QKIQ96PU8 341 aaKnown RBP eCLIP12.39□□□□□ -0.43
SHMT2-214ENST00000554604 KCTD5Q9NXV2 234 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 EURLQ9NYK6 297 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 FETUBQ9UGM5 382 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 PNMA8BQ9ULN7 279 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-214ENST00000554604 HEY1Q9Y5J3 304 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 RAI2Q9Y5P3 530 aa12.39□□□□□ -0.43
SHMT2-214ENST00000554604 SMIM23A6NLE4 172 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 TAF4O00268 1085 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 YY2O15391 372 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 TMEM63AO94886 807 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 TNFP01375 233 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 CAPNS1P04632 268 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 CTPS1P17812 591 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 RBL1P28749 1068 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 SLCO1A2P46721 670 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 IFI35P80217 286 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-214ENST00000554604 BASP1P80723 227 aaKnown RBP12.38□□□□□ -0.43
SHMT2-214ENST00000554604 DSC2Q02487 901 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 KCNJ11Q14654 390 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 NR0B2Q15466 257 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 CNGA3Q16281 694 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 ESRP1Q6NXG1 681 aaKnown RBP12.38□□□□□ -0.43
SHMT2-214ENST00000554604 CCDC13Q8IYE1 715 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 PDIK1LQ8N165 341 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 IFI44Q8TCB0 444 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 MAPK15Q8TD08 544 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 MAML1Q92585 1016 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 FATE1Q969F0 183 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 SCRN2Q96FV2 425 aa12.38□□□□□ -0.43
SHMT2-214ENST00000554604 COQ10AQ96MF6 247 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms