RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 KCNN4O15554 427 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 AKAP10O43572 662 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PI15O43692 258 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SSX5O60225 188 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PDE8AO60658 829 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 RBMXL2O75526 392 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PRSS23O95084 383 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CCNDBP1O95273 360 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 HRGP04196 525 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 APOA4P06727 396 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ASGR1P07306 291 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 WEE2P0C1S8 567 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 KRT3P12035 628 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ACTN1P12814 892 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 MYL4P12829 197 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SELLP14151 372 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 GNAZP19086 355 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CYP3A5P20815 502 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 FGFR4P22455 802 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SLC6A2P23975 617 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PSMA2P25787 234 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 GSTM2P28161 218 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SERPINB3P29508 390 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 TYK2P29597 1187 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CCND3P30281 292 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 HLA-FP30511 346 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 GUCY1A2P33402 732 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SHMT1P34896 483 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 HNF4AP41235 474 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 GARSP41250 739 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 GPD2P43304 727 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PCP4P48539 62 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 EIF2B2P49770 351 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CDKN1CP49918 316 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 BCAP31P51572 246 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ARFIP1P53367 373 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CACNA2D1P54289 1103 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 RPS3AP61247 264 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ATP6V0D1P61421 351 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ECT2LQ008S8 904 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 IL1RL1Q01638 556 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 RHAGQ02094 409 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 KRT17Q04695 432 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 RAD51Q06609 339 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 FOXF2Q12947 444 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 IFIT5Q13325 482 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 UGP2Q16851 508 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 UGT8Q16880 541 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PARP6Q2NL67 630 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 TRIM60Q495X7 471 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ATP13A4Q4VNC1 1196 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 KRTCAP3Q53RY4 240 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 AFMIDQ63HM1 303 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 HAUS3Q68CZ6 603 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PM20D1Q6GTS8 502 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 NIPAL1Q6NVV3 410 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ARHGAP11AQ6P4F7 1023 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 KLHL35Q6PF15 583 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 KDM7AQ6ZMT4 941 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 MACC1Q6ZN28 852 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 USP43Q70EL4 1123 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 RAB11FIP2Q7L804 512 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 KRT74Q7RTS7 529 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PEX26Q7Z412 305 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CCDC25Q86WR0 208 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CAMK1DQ8IU85 385 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 AHI1Q8N157 1196 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ARFGAP2Q8N6H7 521 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 UBR7Q8N806 425 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 MLKLQ8NB16 471 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 OR7D4Q8NG98 312 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 LHFPL5Q8TAF8 219 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 AGR3Q8TD06 166 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ADAMTS16Q8TE57 1224 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 COG1Q8WTW3 980 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 TSPEARQ8WU66 669 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 NAT14Q8WUY8 206 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SLC44A1Q8WWI5 657 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SOCS4Q8WXH5 440 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 MRPS27Q92552 414 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 FUBP1Q96AE4 644 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 RAB7BQ96AH8 199 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 DGCR14Q96DF8 476 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 C19orf60Q96EN9 201 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 VPS39Q96JC1 886 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 BBS4Q96RK4 519 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 RANBP9Q96S59 729 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 NUDT16L1Q9BRJ7 211 aaKnown RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ADPGKQ9BRR6 497 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 MRI1Q9BV20 369 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 FAM126AQ9BYI3 521 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 LHX5Q9H2C1 402 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 TRIM45Q9H8W5 580 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ANKZF1Q9H8Y5 726 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 MARCH7Q9H992 704 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 KCNK13Q9HB14 408 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF287Q9HBT7 754 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SYTL2Q9HCH5 934 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 CD209Q9NNX6 404 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SEMA4GQ9NTN9 838 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms