RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 POPDC2Q9HBU9 364 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 APOBEC3GQ9HC16 384 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 MRM3Q9HC36 420 aaKnown RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 XPNPEP1Q9NQW7 623 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 C8orf4Q9NR00 106 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ZNF302Q9NR11 478 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 FBXO6Q9NRD1 293 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 NSMCE4AQ9NXX6 385 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 STK39Q9UEW8 545 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 SLC7A8Q9UHI5 535 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 USP18Q9UMW8 372 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 CHMP2BQ9UQN3 213 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 TTLL3Q9Y4R7 772 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 NUB1Q9Y5A7 615 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 RAD54BQ9Y620 910 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 ANK1P16157 1881 aa5.96□□□□□ -1.46
VPS33B-203ENST00000554264 FNDC1Q4ZHG4 1894 aaPredicted RBP5.96□□□□□ -1.46
VPS33B-203ENST00000554264 DCHS1Q96JQ0 3298 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 A0A0U1RQF3 1178 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 FAM237BA0A1B0GVD1 139 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 WDR91A4D1P6 747 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 ARHGAP42A6NI28 874 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 LRRIQ4A6NIV6 560 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 ERI2A8K979 691 aaKnown RBP5.95□□□□□ -1.46
VPS33B-203ENST00000554264 H7C0C1 242 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 GPR32O75388 356 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 RFPL1O75677 317 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 C22orf31O95567 290 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 ASLP04424 464 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 EPCAMP16422 314 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 BMP7P18075 431 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 RFC1P35251 1148 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-203ENST00000554264 IGFALSP35858 605 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 CPOXP36551 454 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 SERPINB5P36952 375 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 ATP5OP48047 213 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 POLD2P49005 469 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 HARS2P49590 506 aaKnown RBP5.95□□□□□ -1.46
VPS33B-203ENST00000554264 SERPINB8P50452 374 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 SLURP1P55000 103 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 MLLT6P55198 1093 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-203ENST00000554264 BCAR1P56945 870 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 YWHAZP63104 245 aaKnown RBP5.95□□□□□ -1.46
VPS33B-203ENST00000554264 POU5F1BQ06416 359 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 OVGP1Q12889 678 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 SEMA5AQ13591 1074 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 KRT81Q14533 505 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 RFTN1Q14699 578 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-203ENST00000554264 CNPY1Q3B7I2 92 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 USP41Q3LFD5 358 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 CFAP157Q5JU67 520 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 CLLU1OSQ5K130 101 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 TEDDM1Q5T9Z0 273 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 OGFRL1Q5TC84 451 aaPredicted RBP5.95□□□□□ -1.46
VPS33B-203ENST00000554264 RNF220Q5VTB9 566 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 ANKRD22Q5VYY1 191 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 SLC9A4Q6AI14 798 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 SWSAP1Q6NVH7 229 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 B3GNT6Q6ZMB0 384 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 PRUNE1Q86TP1 453 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 XYLT1Q86Y38 959 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 CROCCP3Q8IVE0 287 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 NLGN4XQ8N0W4 816 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 NDUFAF2Q8N183 169 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 FBXW8Q8N3Y1 598 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 PPM1NQ8N819 430 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 FAM71DQ8N9W8 422 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 TERB1Q8NA31 727 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 RNF169Q8NCN4 708 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 NAT14Q8WUY8 206 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 DEPDC1BQ8WUY9 529 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 UCMAQ8WVF2 138 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 WDR60Q8WVS4 1066 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 NINJ1Q92982 152 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 IGSF21Q96ID5 467 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 HIC2Q96JB3 615 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 CNDP1Q96KN2 507 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 CATSPER2Q96P56 530 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 PPP1R2P1Q96PQ5 205 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 KCNC2Q96PR1 638 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 RNF157Q96PX1 679 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 PANX3Q96QZ0 392 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 NDNQ99608 321 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 ADPGKQ9BRR6 497 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 KIFC3Q9BVG8 833 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 NFKBIZQ9BYH8 718 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 PDZD7Q9H5P4 517 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 ETNK2Q9NVF9 386 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 RIC8BQ9NVN3 520 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 TXNDC16Q9P2K2 825 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 EPS15L1Q9UBC2 864 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 DPP7Q9UHL4 492 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 PSMD13Q9UNM6 376 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 DMTF1Q9Y222 760 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 ATP23Q9Y6H3 246 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.95□□□□□ -1.46
VPS33B-203ENST00000554264 R4GN57 208 aa5.95□□□□□ -1.46
VPS33B-203ENST00000554264 MYO15AQ9UKN7 3530 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 A0A088AWK7 358 aa5.94□□□□□ -1.46
VPS33B-203ENST00000554264 EME2A4GXA9 379 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms