RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ATP13A5Q4VNC0 1218 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 CEP85LQ5SZL2 805 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 PSAPL1Q6NUJ1 521 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 ADGRD1Q6QNK2 874 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 CCDC91Q7Z6B0 441 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 SERPINA9Q86WD7 417 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 UNC5BQ8IZJ1 945 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 TP53I13Q8NBR0 393 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-210ENST00000553950 GDAP1Q8TB36 358 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 SCAMP4Q969E2 229 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 TSPAN17Q96FV3 270 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 AGAP2Q99490 1192 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 GPR174Q9BXC1 333 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 CLPBQ9H078 707 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 CD93Q9NPY3 652 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 SENP1Q9P0U3 644 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 MARCH4Q9P2E8 410 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-210ENST00000553950 LGALS13Q9UHV8 139 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 NFS1Q9Y697 457 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 THADAQ6YHU6 1953 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 BDP1A6H8Y1 2624 aa14.39□□□□□ -0.11
SHMT2-210ENST00000553950 TP53BP1Q12888 1972 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 IGLV3-16A0A075B6K0 115 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 UBA6A0AVT1 1052 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 CXorf49A8MYA2 514 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 CACNB4O00305 520 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 PRMT5O14744 637 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 MAP3K13O43283 966 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 VEGFDO43915 354 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 AP2A2O94973 939 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 FSBPO95073 299 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 GSTM1P09488 218 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 MYCLP1P12525 358 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 TDGF1P13385 188 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 MSH3P20585 1137 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 MAT2AP31153 395 aaKnown RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 DPP6P42658 865 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 GSTM4Q03013 218 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 DBN1Q16643 649 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 WSCD2Q2TBF2 565 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 UBAP2Q5T6F2 1119 aaKnown RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 GPRC6AQ5T6X5 926 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 FAM45BPQ6NSW5 357 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 PNCKQ6P2M8 343 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 KYAT3Q6YP21 454 aaKnown RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 ZC3HC1Q86WB0 502 aaKnown RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 DENND6AQ8IWF6 608 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 FAM45AQ8TCE6 357 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 EPS8L3Q8TE67 593 aaKnown RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 DCAKDQ8WVC6 231 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 LPGAT1Q92604 370 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 HIC2Q96JB3 615 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 VPS39Q96JC1 886 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 ZNF514Q96K75 400 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 SMYD2Q9NRG4 433 aa14.38□□□□□ -0.11
SHMT2-210ENST00000553950 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 TNRC6BQ9UPQ9 1833 aaKnown RBP14.38□□□□□ -0.11
SHMT2-210ENST00000553950 A0A1W2PPC4 97 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 KLHL33A6NCF5 533 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 SMIM23A6NLE4 172 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 A6NNZ2 444 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 FADS2P1A8MWK0 482 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 PRR33A8MZF0 331 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 RGS16O15492 202 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 SLC25A14O95258 325 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 PAK4O96013 591 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 IGHV4-34P06331 123 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 ITGA2BP08514 1039 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 SNRPAP09012 282 aaKnown RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 HOXC4P09017 264 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 HTR1BP28222 390 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 IGFALSP35858 605 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 PXNP49023 591 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 SERPINB8P50452 374 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 SLC12A2P55011 1212 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 KIAA1024LP59773 190 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 YPEL5P62699 121 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 MPP1Q00013 466 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 CDK3Q00526 305 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 CSTF1Q05048 431 aaKnown RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 CTBP1Q13363 440 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 TMED2Q15363 201 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 SMAD1Q15797 465 aaKnown RBP14.37□□□□□ -0.11
SHMT2-210ENST00000553950 HSP90B2PQ58FF3 399 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 WDR45BQ5MNZ6 344 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 UGT3A1Q6NUS8 523 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 RFLNAQ6ZTI6 216 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 LPCAT2Q7L5N7 544 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 HEATR4Q86WZ0 1026 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 PIANPQ8IYJ0 282 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 OR2W6PQ8NHA6 318 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 GAB3Q8WWW8 586 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 RLN3Q8WXF3 142 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 SNX19Q92543 992 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 CENPTQ96BT3 561 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 PGM2Q96G03 612 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 PANX3Q96QZ0 392 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 GPR22Q99680 433 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 TEX101Q9BY14 249 aa14.37□□□□□ -0.11
SHMT2-210ENST00000553950 C6orf106Q9H6K1 298 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms