RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZNF182P17025 639 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-210ENST00000553693 XBP1P17861 261 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 UBA1P22314 1058 aaKnown RBP3.77□□□□□ -1.81
SCFD1-210ENST00000553693 ALDH4A1P30038 563 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 MLLT10P55197 1068 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 OLIG2Q13516 323 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 DCTN2Q13561 401 aaKnown RBP3.77□□□□□ -1.81
SCFD1-210ENST00000553693 FAM69AQ5T7M9 428 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 GORABQ5T7V8 394 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 ARHGAP17Q68EM7 881 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 DGLUCYQ7Z3D6 616 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 NRROSQ86YC3 692 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 MAP7D3Q8IWC1 876 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 CTAGE4Q8IX94 777 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 ZNF485Q8NCK3 441 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 ACVR1CQ8NER5 493 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 HTRA1Q92743 480 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 GTF3C6Q969F1 213 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 LITAFQ99732 161 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 SLC25A18Q9H1K4 315 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 MYH16Q9H6N6 1097 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 KIF9Q9HAQ2 790 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 SLC28A3Q9HAS3 691 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 RRN3Q9NYV6 651 aa3.77□□□□□ -1.81
SCFD1-210ENST00000553693 ZNF624Q9P2J8 865 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-210ENST00000553693 TDRD9Q8NDG6 1382 aaKnown RBP3.76□□□□□ -1.81
SCFD1-210ENST00000553693 CLASP1Q7Z460 1538 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 IGKV3D-15A0A087WSY6 115 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 EIF3CLB5ME19 914 aaKnown RBP3.76□□□□□ -1.81
SCFD1-210ENST00000553693 NCAM2O15394 837 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 KCNN4O15554 427 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 PDE9AO76083 593 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 CSF2RAP15509 400 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 DCTP40126 519 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 C18orf63Q68DL7 685 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 ATF7IPQ6VMQ6 1270 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 CCDC13Q8IYE1 715 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 SRBD1Q8N5C6 995 aaKnown RBP3.76□□□□□ -1.81
SCFD1-210ENST00000553693 STPG4Q8N801 248 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 ADAD2Q8NCV1 583 aaKnown RBP3.76□□□□□ -1.81
SCFD1-210ENST00000553693 HMGCLL1Q8TB92 370 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 TAF15Q92804 592 aaKnown RBP eCLIP3.76□□□□□ -1.81
SCFD1-210ENST00000553693 TMEM68Q96MH6 324 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 USP44Q9H0E7 712 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-210ENST00000553693 MARCH4Q9P2E8 410 aaPredicted RBP3.76□□□□□ -1.81
SCFD1-210ENST00000553693 SLC13A4Q9UKG4 626 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 CAMK2AQ9UQM7 478 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 CYP46A1Q9Y6A2 500 aa3.76□□□□□ -1.81
SCFD1-210ENST00000553693 TARBP1Q13395 1621 aaKnown RBP3.76□□□□□ -1.81
SCFD1-210ENST00000553693 GAPVD1Q14C86 1478 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 RAD54L2Q9Y4B4 1467 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 SMIM1B2RUZ4 78 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 BUD23O43709 281 aaKnown RBP3.75□□□□□ -1.81
SCFD1-210ENST00000553693 CTSVO60911 334 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 NR2F2P24468 414 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 PIP4K2AP48426 406 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-210ENST00000553693 PPM1FP49593 454 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-210ENST00000553693 TAF6P49848 677 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 CLDN20P56880 219 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 ACVR2BQ13705 512 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 PAPD4Q6PIY7 484 aaKnown RBP3.75□□□□□ -1.81
SCFD1-210ENST00000553693 ZNF354CQ86Y25 554 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 RDM1Q8NG50 284 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 ST8SIA4Q92187 359 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 ABHD8Q96I13 439 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 FSD1Q9BTV5 496 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 EGLN1Q9GZT9 426 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 SIL1Q9H173 461 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 OGFRQ9NZT2 677 aa3.75□□□□□ -1.81
SCFD1-210ENST00000553693 INTS6Q9UL03 887 aaKnown RBP3.75□□□□□ -1.81
SCFD1-210ENST00000553693 TOP2AP11388 1531 aaKnown RBP3.75□□□□□ -1.81
SCFD1-210ENST00000553693 CCDC88BA6NC98 1476 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 SNAPC4Q5SXM2 1469 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 A0A0G2JLW4 131 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 A0A1B0GU03 582 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 A0A1W2PRG0 241 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 OR5K3A6NET4 321 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 ANKRD66B4E2M5 251 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 FAM90A26D6RGX4 464 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 M0QZ24 198 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 ANKRD28O15084 1053 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 TBX6O95947 436 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-210ENST00000553693 PATE4P0C8F1 98 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 KRT5P13647 590 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 NR1D1P20393 614 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 UGT1A1P22309 533 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 ABCD3P28288 659 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 APOBEC1P41238 236 aaKnown RBP3.74□□□□□ -1.81
SCFD1-210ENST00000553693 MAPK9P45984 424 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 ABCC8Q09428 1581 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 CXorf66Q5JRM2 361 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-210ENST00000553693 CDC73Q6P1J9 531 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 INO80CQ6PI98 192 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-210ENST00000553693 DNMBPQ6XZF7 1577 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 ARMC8Q8IUR7 673 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 MORC4Q8TE76 937 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 PSPC1Q8WXF1 523 aaKnown RBP3.74□□□□□ -1.81
SCFD1-210ENST00000553693 IGSF8Q969P0 613 aa3.74□□□□□ -1.81
SCFD1-210ENST00000553693 PHF21AQ96BD5 680 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms