RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 NTPCRQ9BSD7 190 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 FUCA2Q9BTY2 467 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 GTPBP4Q9BZE4 634 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 RWDD1Q9H446 243 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 ASB7Q9H672 318 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 POLD4Q9HCU8 107 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 INTS13Q9NVM9 706 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 ELOVL2Q9NXB9 296 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 NCKIPSDQ9NZQ3 722 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 LRIT1Q9P2V4 623 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 LSM7Q9UK45 103 aaKnown RBP6.06□□□□□ -1.44
ATXN3-223ENST00000553686 PLA2G4CQ9UP65 541 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 ENTPD2Q9Y5L3 495 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 NAV3Q8IVL0 2385 aa6.06□□□□□ -1.44
ATXN3-223ENST00000553686 NUP210Q8TEM1 1887 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 A0A1W2PNU3 283 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 E9PLN8 166 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 TOR1BO14657 336 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 NVLO15381 856 aaKnown RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 HNRNPRO43390 633 aaKnown RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 COCHO43405 550 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 PEX1O43933 1283 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 RNASEH1O60930 286 aaKnown RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 DEXIO95424 95 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 PDGFRBP09619 1106 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 PF4V1P10720 104 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 TYRP1P17643 537 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 DGKAP23743 735 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 YWHAQP27348 245 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 RPA1P27694 616 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 CLK3P49761 638 aaKnown RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 TUBP50607 506 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 CCR5P51681 352 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 MAP2K6P52564 334 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 GALCP54803 685 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 CYP4F2P78329 520 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 POU6F2P78424 691 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 NUCB1Q02818 461 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 KRT32Q14532 448 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 NAPEPLDQ6IQ20 393 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 PIK3AP1Q6ZUJ8 805 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 TIPARPQ7Z3E1 657 aaKnown RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 FAM90A1Q86YD7 464 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 FAM114A1Q8IWE2 563 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 SLC25A45Q8N413 288 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 FBXO39Q8N4B4 442 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 PDCL2Q8N4E4 241 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 TEX19Q8NA77 164 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 OR2T34Q8NGX1 318 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 SLC30A5Q8TAD4 765 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 GTF3C6Q969F1 213 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 MVB12AQ96EY5 273 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 BICD1Q96G01 975 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 C8orf48Q96LL4 319 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 TCEANC2Q96MN5 208 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 CATSPER2Q96P56 530 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 SMOQ99835 787 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 VKORC1Q9BQB6 163 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 CIPCQ9C0C6 399 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 WDCPQ9H6R7 721 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF71Q9NQZ8 489 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 RLIMQ9NVW2 624 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 DPP3Q9NY33 737 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 C2CD2Q9Y426 696 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 SNX14Q9Y5W7 946 aa6.05□□□□□ -1.44
ATXN3-223ENST00000553686 HELZP42694 1942 aaKnown RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 KIF26AQ9ULI4 1882 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF785A8K8V0 405 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 H0YCG3 227 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 CPLX1O14810 134 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 OGTO15294 1046 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 SLC16A4O15374 487 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 YY2O15391 372 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 SDC3O75056 442 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 RTN2O75298 545 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 MED24O75448 989 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 RTN3O95197 1032 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 PRKCGP05129 697 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 CENPBP07199 599 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 OR52Z1P0C646 297 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 IRF1P10914 325 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 LPOP22079 712 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 GNLYP22749 145 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 BDNFP23560 247 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 PRKCHP24723 683 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 ACAT1P24752 427 aaKnown RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 NUDT1P36639 197 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 FOLR3P41439 243 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 PIK3CGP48736 1102 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 MFAP3P55082 362 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 RPS14P62263 151 aaKnown RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 HABP2Q14520 560 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 ZNF776Q68DI1 518 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 FAM171BQ6P995 826 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 VWA1Q6PCB0 445 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 NCEH1Q6PIU2 408 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 CPLX2Q6PUV4 134 aaKnown RBP6.04□□□□□ -1.44
ATXN3-223ENST00000553686 ANKS1BQ7Z6G8 1248 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 SMC5Q8IY18 1101 aa6.04□□□□□ -1.44
ATXN3-223ENST00000553686 HTR3CQ8WXA8 447 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms