RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 CES5AQ6NT32 575 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 CHST3Q7LGC8 479 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 VPS52Q8N1B4 723 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 FAM184AQ8NB25 1140 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 C7orf57Q8NEG2 295 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 VPS37AQ8NEZ2 397 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 CMASQ8NFW8 434 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-218ENST00000553309 AFG1LQ8WV93 481 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 KCNJ9Q92806 393 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 P2RX5Q93086 422 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 SLC39A13Q96H72 371 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 SF3B5Q9BWJ5 86 aaKnown RBP5.12□□□□□ -1.59
ATXN3-218ENST00000553309 FRMD8Q9BZ67 464 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-218ENST00000553309 MYLK2Q9H1R3 596 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 PIH1D3Q9NQM4 214 aaKnown RBP5.12□□□□□ -1.59
ATXN3-218ENST00000553309 HIF1ANQ9NWT6 349 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 MCM9Q9NXL9 1143 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 UTP6Q9NYH9 597 aaKnown RBP5.12□□□□□ -1.59
ATXN3-218ENST00000553309 KCND3Q9UK17 655 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 RCE1Q9Y256 329 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 COMMD10Q9Y6G5 202 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 PTPN13Q12923 2485 aa5.12□□□□□ -1.59
ATXN3-218ENST00000553309 PLXNA4Q9HCM2 1894 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 TRBV5-7A0A0A0MS05 114 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 CCDC194A0A1B0GVG4 234 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 HIDE1A8MVS5 230 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 IPO5O00410 1097 aaKnown RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 ATP2A1O14983 1001 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 HNRNPRO43390 633 aaKnown RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 KCNK5O95279 499 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 HLA-DQA2P01906 255 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 CYP1A2P05177 515 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 VDRP11473 427 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 PLA2G2AP14555 144 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 GSTM2P28161 218 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 RASSF2P50749 326 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 CYP2J2P51589 502 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 TRAF1Q13077 416 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 BLMHQ13867 455 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 KCNC3Q14003 757 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 MORC3Q14149 939 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 UBAP2Q5T6F2 1119 aaKnown RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 CRELD2Q6UXH1 353 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 CAMK1DQ8IU85 385 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 FAM185AQ8N0U4 392 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 PDCL2Q8N4E4 241 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 SAMD3Q8N6K7 520 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 GABPB2Q8TAK5 448 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 STT3BQ8TCJ2 826 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 SLC2A12Q8TD20 617 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 ZNF396Q96N95 335 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 NECTIN4Q96NY8 510 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 MPHOSPH6Q99547 160 aaKnown RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 TMEM204Q9BSN7 226 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 POLR3CQ9BUI4 534 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 UPF2Q9HAU5 1272 aaKnown RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 SLC38A10Q9HBR0 1119 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 TMEM248Q9NWD8 314 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 OGFRQ9NZT2 677 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 RSPH14Q9UHP6 348 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 TAGLN3Q9UI15 199 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 RAB23Q9ULC3 237 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 PCDHA7Q9UN72 937 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 INSL5Q9Y5Q6 135 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 SLC4A4Q9Y6R1 1079 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 MYO5AQ9Y4I1 1855 aaKnown RBP5.11□□□□□ -1.59
ATXN3-218ENST00000553309 LCTP09848 1927 aa5.11□□□□□ -1.59
ATXN3-218ENST00000553309 HMX3A6NHT5 357 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 BECN2A8MW95 431 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 HMMRO75330 724 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 PEX14O75381 377 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 IDH1O75874 414 aaKnown RBP5.1□□□□□ -1.59
ATXN3-218ENST00000553309 NDUFB10O96000 172 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 SKILP12757 684 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 CPA1P15085 419 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 CHN1P15882 459 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 HOXB8P17481 243 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-218ENST00000553309 HOXA11P31270 313 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-218ENST00000553309 TNFSF8P32971 234 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 MTHFRP42898 656 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 RFX2P48378 723 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 TRIM14Q14142 442 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 SF3A2Q15428 464 aaKnown RBP5.1□□□□□ -1.59
ATXN3-218ENST00000553309 ZNF528Q3MIS6 628 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 KLHL22Q53GT1 634 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 DNAJC21Q5F1R6 531 aaKnown RBP5.1□□□□□ -1.59
ATXN3-218ENST00000553309 DGAT2L7PQ6IED9 249 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 TMEM184AQ6ZMB5 413 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 SYNE3Q6ZMZ3 975 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 Q6ZTK2 550 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 CACNA2D3Q8IZS8 1091 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 FBXL14Q8N1E6 418 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 DPP10Q8N608 796 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 KDM1BQ8NB78 822 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 ZBTB44Q8NCP5 570 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 ENGASEQ8NFI3 743 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 ZNF689Q96CS4 500 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-218ENST00000553309 URB1-AS1Q96HZ7 61 aa5.1□□□□□ -1.59
ATXN3-218ENST00000553309 ZNF479Q96JC4 524 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms