RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 CCL11P51671 97 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 PGDP52209 483 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 EPHA4P54764 986 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 LRP8Q14114 963 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 RFTN1Q14699 578 aaPredicted RBP8.38□□□□□ -1.07
CDK4-213ENST00000552713 PAPD7Q5XG87 772 aaKnown RBP8.38□□□□□ -1.07
CDK4-213ENST00000552713 LRRC66Q68CR7 880 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 JMJD6Q6NYC1 403 aaPredicted RBP8.38□□□□□ -1.07
CDK4-213ENST00000552713 RFX8Q6ZV50 586 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 CYP4V2Q6ZWL3 525 aaPredicted RBP8.38□□□□□ -1.07
CDK4-213ENST00000552713 MON1BQ7L1V2 547 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 SLC9B2Q86UD5 537 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 ZNF677Q86XU0 584 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 PHF13Q86YI8 300 aaPredicted RBP8.38□□□□□ -1.07
CDK4-213ENST00000552713 RASGRP3Q8IV61 690 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 PIH1D2Q8WWB5 315 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 SCRN2Q96FV2 425 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 TGM7Q96PF1 710 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 PLEKHG4BQ96PX9 1271 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 WDR24Q96S15 920 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 RIOK2Q9BVS4 552 aaKnown RBP8.38□□□□□ -1.07
CDK4-213ENST00000552713 DHX35Q9H5Z1 703 aaKnown RBP8.38□□□□□ -1.07
CDK4-213ENST00000552713 LHX9Q9NQ69 397 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 KCTD5Q9NXV2 234 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 DONSONQ9NYP3 566 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 CPNE7Q9UBL6 633 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 CNOT8Q9UFF9 292 aaKnown RBP8.38□□□□□ -1.07
CDK4-213ENST00000552713 AP4E1Q9UPM8 1137 aa8.38□□□□□ -1.07
CDK4-213ENST00000552713 PKDREJQ9NTG1 2253 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 CSMD1Q96PZ7 3565 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 GOLGA6L3A6NEY3 463 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 LILRA5A6NI73 299 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 FADS2P1A8MWK0 482 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 FGF5P12034 268 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 F3P13726 295 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 ELAVL4P26378 380 aaKnown RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 SOX5P35711 763 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 GARSP41250 739 aaKnown RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 NOP2P46087 812 aaKnown RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 NSFP46459 744 aaKnown RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 RENBPP51606 427 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 AIF1P55008 147 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 JAM2P57087 298 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 PPP1CAP62136 330 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 UBE2IP63279 158 aaKnown RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 CAMK4Q16566 473 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 UGT8Q16880 541 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 CLEC16AQ2KHT3 1053 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 ZNF648Q5T619 568 aaPredicted RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 TMCO4Q5TGY1 634 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 FAM69BQ5VUD6 431 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 PWWP2BQ6NUJ5 590 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 CERS6Q6ZMG9 384 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 PLXDC1Q8IUK5 500 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 RBMXL3Q8N7X1 1067 aaKnown RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 RSC1A1Q92681 617 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 SH3KBP1Q96B97 665 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 NUDCD1Q96RS6 583 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 RANBP9Q96S59 729 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 MGME1Q9BQP7 344 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 HERPUD2Q9BSE4 406 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 CNPY3Q9BT09 278 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 SNRNP25Q9BV90 132 aaKnown RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 BRD8Q9H0E9 1235 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 ING2Q9H160 280 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 ARFGAP3Q9NP61 516 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 NLRC4Q9NPP4 1024 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 ETNK2Q9NVF9 386 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 ZNF624Q9P2J8 865 aaPredicted RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 PCSK1NQ9UHG2 260 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 PADI1Q9ULC6 663 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 PPIL1Q9Y3C6 166 aa8.37□□□□□ -1.07
CDK4-213ENST00000552713 PCDHGA9Q9Y5G4 932 aaKnown RBP8.37□□□□□ -1.07
CDK4-213ENST00000552713 PRRC2CQ9Y520 2896 aaKnown RBP8.36□□□□□ -1.07
CDK4-213ENST00000552713 PES1O00541 588 aaKnown RBP8.36□□□□□ -1.07
CDK4-213ENST00000552713 FZD6O60353 706 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 CBX6O95503 412 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 RECKO95980 971 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 CALB1P05937 261 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 CCNYL3P0C7X3 344 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 NFKBIAP25963 317 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 HTR7P34969 479 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 SLC19A1P41440 591 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 PTGIRP43119 386 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 STC1P52823 247 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 POLR2FP61218 127 aaKnown RBP8.36□□□□□ -1.07
CDK4-213ENST00000552713 DPYSQ14117 519 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 ZNF235Q14590 738 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 IL11RAQ14626 422 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 KCNAB1Q14722 419 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 NR6A1Q15406 480 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 TPD52L1Q16890 204 aaPredicted RBP8.36□□□□□ -1.07
CDK4-213ENST00000552713 PPP6R3Q5H9R7 873 aaPredicted RBP8.36□□□□□ -1.07
CDK4-213ENST00000552713 ARMC12Q5T9G4 340 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 SLC6A19Q695T7 634 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 DNAJC24Q6P3W2 148 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 TRIM72Q6ZMU5 477 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 FAM92BQ6ZTR7 304 aa8.36□□□□□ -1.07
CDK4-213ENST00000552713 TMEM26Q6ZUK4 368 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms