RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 TMEM168Q9H0V1 697 aa15.33■□□□□ 0.04
BRF1-220ENST00000552127 ABCG8Q9H221 673 aa15.33■□□□□ 0.04
BRF1-220ENST00000552127 CARS2Q9HA77 564 aaKnown RBP15.33■□□□□ 0.04
BRF1-220ENST00000552127 ZNF106Q9H2Y7 1883 aaKnown RBP15.33■□□□□ 0.04
BRF1-220ENST00000552127 UNC13CQ8NB66 2214 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 SOWAHDA6NJG2 315 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 NDUFA10O95299 355 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 SOD1P00441 154 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 RPLP0P05388 317 aaKnown RBP15.32■□□□□ 0.04
BRF1-220ENST00000552127 CEACAM5P06731 702 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 CD82P27701 267 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 GPR1P46091 355 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 MARCKSL1P49006 195 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 MAPK10P53779 464 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 MLLT10P55197 1068 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 PTSQ03393 145 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 PRKD1Q15139 912 aaPredicted RBP15.32■□□□□ 0.04
BRF1-220ENST00000552127 QPCTQ16769 361 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 ADAMTSL4Q6UY14 1074 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 RAVER1Q8IY67 606 aaKnown RBP15.32■□□□□ 0.04
BRF1-220ENST00000552127 NRSN1Q8IZ57 195 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 CCDC74AQ96AQ1 378 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 IMP4Q96G21 291 aaKnown RBP15.32■□□□□ 0.04
BRF1-220ENST00000552127 AGAP3Q96P47 875 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 ADGRE3Q9BY15 652 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 ZNF768Q9H5H4 540 aaKnown RBP15.32■□□□□ 0.04
BRF1-220ENST00000552127 ZFHX3Q15911 3703 aa15.32■□□□□ 0.04
BRF1-220ENST00000552127 C1orf232A0A0U1RR37 186 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 B4DGG1 531 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.31■□□□□ 0.04
BRF1-220ENST00000552127 CST8O60676 142 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 IPO7O95373 1038 aaKnown RBP15.31■□□□□ 0.04
BRF1-220ENST00000552127 CLDN7O95471 211 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 PYGLP06737 847 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 PECAM1P16284 738 aaPredicted RBP15.31■□□□□ 0.04
BRF1-220ENST00000552127 DCTP40126 519 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 NR2C2P49116 596 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 GALNT3Q14435 633 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 SLC14A2Q15849 920 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 TFDP3Q5H9I0 405 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 FAM182AQ5T1J6 154 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 B4GALNT4Q76KP1 1039 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 BZW1Q7L1Q6 419 aaKnown RBP15.31■□□□□ 0.04
BRF1-220ENST00000552127 NT5DC3Q86UY8 548 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 NLRP8Q86W28 1048 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 TMTC1Q8IUR5 882 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 FAM46DQ8NEK8 389 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 GPR156Q8NFN8 814 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 OR6C4Q8NGE1 309 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 CCL4L1Q8NHW4 92 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 SCAMP4Q969E2 229 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 TRIB3Q96RU7 358 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 MLPHQ9BV36 600 aaPredicted RBP15.31■□□□□ 0.04
BRF1-220ENST00000552127 SLC25A51Q9H1U9 297 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 SUDS3Q9H7L9 328 aaPredicted RBP15.31■□□□□ 0.04
BRF1-220ENST00000552127 SUFUQ9UMX1 484 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 SLC17A4Q9Y2C5 497 aa15.31■□□□□ 0.04
BRF1-220ENST00000552127 EPN1Q9Y6I3 576 aaPredicted RBP15.31■□□□□ 0.04
BRF1-220ENST00000552127 RP1L1Q8IWN7 2480 aaPredicted RBP15.31■□□□□ 0.04
BRF1-220ENST00000552127 hCG_1818297A0A087WSY0 165 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 ANKRD66B4E2M5 251 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 SEMA7AO75326 666 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 IVLP07476 585 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 GNLYP22749 145 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 PTPN3P26045 913 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 GNPDA1P46926 289 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 ILF3Q12906 894 aaKnown RBP eCLIP15.3■□□□□ 0.04
BRF1-220ENST00000552127 LLGL1Q15334 1064 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 C14orf28Q4W4Y0 310 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 KAZNQ674X7 775 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 CAPRIN2Q6IMN6 1127 aaKnown RBP15.3■□□□□ 0.04
BRF1-220ENST00000552127 OGFOD3Q6PK18 319 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 DOK6Q6PKX4 331 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 DAAM2Q86T65 1068 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 GAS2L3Q86XJ1 694 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 CCDC50Q8IVM0 306 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 RCOR2Q8IZ40 523 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 EXD1Q8NHP7 514 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 GPBAR1Q8TDU6 330 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 PTCD2Q8WV60 388 aaKnown RBP15.3■□□□□ 0.04
BRF1-220ENST00000552127 TFB1MQ8WVM0 346 aaKnown RBP15.3■□□□□ 0.04
BRF1-220ENST00000552127 KRT35Q92764 455 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 TMEM159Q96B96 161 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 ABHD17AQ96GS6 310 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 RBM41Q96IZ5 413 aaKnown RBP15.3■□□□□ 0.04
BRF1-220ENST00000552127 CATSPER2Q96P56 530 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 AGAP2Q99490 1192 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 RIOK2Q9BVS4 552 aaKnown RBP15.3■□□□□ 0.04
BRF1-220ENST00000552127 GSDMCQ9BYG8 508 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 GLOD4Q9HC38 313 aa15.3■□□□□ 0.04
BRF1-220ENST00000552127 TRNAU1APQ9NX07 287 aaKnown RBP15.3■□□□□ 0.04
BRF1-220ENST00000552127 SAE1Q9UBE0 346 aaPredicted RBP15.3■□□□□ 0.04
BRF1-220ENST00000552127 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.3■□□□□ 0.04
BRF1-220ENST00000552127 SETD2Q9BYW2 2564 aaPredicted RBP15.3■□□□□ 0.04
BRF1-220ENST00000552127 RCCD1A6NED2 376 aa15.29■□□□□ 0.04
BRF1-220ENST00000552127 STMND1H3BQB6 276 aa15.29■□□□□ 0.04
BRF1-220ENST00000552127 ZRANB2O95218 330 aaKnown RBP eCLIP15.29■□□□□ 0.04
BRF1-220ENST00000552127 FUCA1P04066 466 aa15.29■□□□□ 0.04
BRF1-220ENST00000552127 LIFP15018 202 aa15.29■□□□□ 0.04
BRF1-220ENST00000552127 POLD2P49005 469 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms