RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 ZNF761Q86XN6 746 aaPredicted RBP12.9□□□□□ -0.34
NPAS3-209ENST00000551008 GALNT13Q8IUC8 556 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 SFRP1Q8N474 314 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 ZNF248Q8NDW4 579 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 P3H4Q92791 437 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 RBM41Q96IZ5 413 aaKnown RBP12.9□□□□□ -0.34
NPAS3-209ENST00000551008 FCRL5Q96RD9 977 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 FAM118BQ9BPY3 351 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 THSD1Q9NS62 852 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 TMEM9Q9P0T7 183 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 TBC1D29Q9UFV1 150 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 SLC23A2Q9UGH3 650 aa12.9□□□□□ -0.34
NPAS3-209ENST00000551008 PIKFYVEQ9Y2I7 2098 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 IGHV1OR21-1A0A087WYE8 117 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 AGRPO00253 132 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 CHUKO15111 745 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 RRP8O43159 456 aaKnown RBP12.89□□□□□ -0.35
NPAS3-209ENST00000551008 GPR39O43194 453 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 NUAK1O60285 661 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 ASMTLO95671 621 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 ITGA2BP08514 1039 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 ACP5P13686 325 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 RBL1P28749 1068 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 FASLGP48023 281 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 ARSDP51689 593 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 VAV2P52735 878 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 CLN3Q13286 438 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 OLIG2Q13516 323 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 NKAIN2Q5VXU1 208 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 FOXR1Q6PIV2 292 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 USP53Q70EK8 1073 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 CCDC50Q8IVM0 306 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 ZNF547Q8IVP9 402 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 TRAM1L1Q8N609 369 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 ACTL9Q8TC94 416 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 CCHCR1Q8TD31 782 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 HTR3CQ8WXA8 447 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 GLYATL1Q969I3 302 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 PMEPA1Q969W9 287 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 OSBPL8Q9BZF1 889 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 CARD9Q9H257 536 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 BPIFA1Q9NP55 256 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 FAM153AQ9UHL3 310 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 KCNK6Q9Y257 313 aa12.89□□□□□ -0.35
NPAS3-209ENST00000551008 TRBV23OR9-2A0A075B6M9 112 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 IGHV5-10-1A0A0J9YXX1 117 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 HACD1B0YJ81 288 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 MTX2O75431 263 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 CPNE6O95741 557 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 PYGBP11216 843 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 PYGMP11217 842 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 SLC5A2P31639 672 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 ADRA1AP35348 466 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 MLLT3P42568 568 aaPredicted RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 COPS2P61201 443 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 OTUD4Q01804 1114 aaKnown RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 SRSF6Q13247 344 aaKnown RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 MSLNQ13421 630 aaPredicted RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 XRCC4Q13426 336 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 SQSTM1Q13501 440 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 LRP8Q14114 963 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 PTPRCAPQ14761 206 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 AMZ1Q400G9 498 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 ODF2Q5BJF6 829 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 ZNF569Q5MCW4 686 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 LRRC69Q6ZNQ3 347 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 MICALCLQ6ZW33 695 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 BZW1Q7L1Q6 419 aaKnown RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 CHST15Q7LFX5 561 aaPredicted RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 C11orf96Q7Z7L8 435 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 KLHDC8BQ8IXV7 354 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 FBXO39Q8N4B4 442 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 KCNE4Q8WWG9 221 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 TMEM74Q96NL1 305 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 DESI2Q9BSY9 194 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 ZSCAN5AQ9BUG6 496 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 SPATA16Q9BXB7 569 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 GPR63Q9BZJ6 419 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 OR2AG1Q9H205 316 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 GBA3Q9H227 469 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 CPNE5Q9HCH3 593 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 IL17CQ9P0M4 197 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 SCHIP1Q9P0W5 487 aaPredicted RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 KLHL8Q9P2G9 620 aaPredicted RBP12.88□□□□□ -0.35
NPAS3-209ENST00000551008 ZNHIT2Q9UHR6 403 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 EFR3BQ9Y2G0 817 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 LOXL2Q9Y4K0 774 aa12.88□□□□□ -0.35
NPAS3-209ENST00000551008 COL6A6A6NMZ7 2263 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 RHPN2P1A8MT19 583 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 DDX3YO15523 660 aaKnown RBP12.87□□□□□ -0.35
NPAS3-209ENST00000551008 KLK10O43240 276 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 EFSO43281 561 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 MTSS1O43312 755 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 GRID2O43424 1007 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 EPOP01588 193 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 RBMS1P29558 406 aaKnown RBP12.87□□□□□ -0.35
NPAS3-209ENST00000551008 ALDH4A1P30038 563 aa12.87□□□□□ -0.35
NPAS3-209ENST00000551008 CDC25BP30305 580 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms