RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 PPM1MQ96MI6 270 aa16.77■□□□□ 0.27
ATXN2-219ENST00000550104 C9orf16Q9BUW7 83 aa16.77■□□□□ 0.27
ATXN2-219ENST00000550104 TRMT11Q7Z4G4 463 aaKnown RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 GPR141Q7Z602 305 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 FAM9CQ8IZT9 166 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 CPSF7Q8N684 471 aaKnown RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 RNF217Q8TC41 542 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 PPP3R2Q96LZ3 170 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 TRAPPC9Q96Q05 1148 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 IPPKQ9H8X2 491 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 MRM3Q9HC36 420 aaKnown RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 MYRFQ9Y2G1 1151 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 USP3Q9Y6I4 520 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 LTBP1Q14766 1721 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 CDC7O00311 574 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 COL6A1P12109 1028 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 LAG3P18627 525 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 PPM1AP35813 382 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 TRIM25Q14258 630 aaKnown RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 HIST2H2ACQ16777 129 aaPredicted RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 AP5B1Q2VPB7 878 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 HIST2H2AA3Q6FI13 130 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 GRAMD4Q6IC98 578 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 ARHGAP12Q8IWW6 846 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 CLHC1Q8NHS4 586 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 OLFM1Q99784 485 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 SH3BP4Q9P0V3 963 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 GIMAP2Q9UG22 337 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 SLC13A4Q9UKG4 626 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 BLOC1S6Q9UL45 172 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 TMCO1Q9UM00 188 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 TBC1D30Q9Y2I9 924 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 MCM3APO60318 1980 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 DOCK5Q9H7D0 1870 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 CYP2A6P11509 494 aaPredicted RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 MAGEA3P43357 314 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 SPDYE7PQ495Y7 208 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 ERAP2Q6P179 960 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 RANBP10Q6VN20 620 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 CERS6Q6ZMG9 384 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 FAM43BQ6ZT52 329 aaPredicted RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 ENDOVQ8N8Q3 282 aaKnown RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 NT5C3BQ969T7 300 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 AKTIPQ9H8T0 292 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 FBRSL1Q9HCM7 1045 aaKnown RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 PCDHB1Q9Y5F3 818 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 CCL16O15467 120 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 KCNH1O95259 989 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 GJA1P17302 382 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 MPPE1Q53F39 396 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 LRRC73Q5JTD7 316 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 MAPK15Q8TD08 544 aa16.76■□□□□ 0.27
ATXN2-219ENST00000550104 HOPXQ9BPY8 73 aaPredicted RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 TFB2MQ9H5Q4 396 aaKnown RBP16.76■□□□□ 0.27
ATXN2-219ENST00000550104 BBIP1A8MTZ0 92 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 G3V2L1 256 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ESR1P03372 595 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 CAPN1P07384 714 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 UGT1A6P19224 532 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 UGT1A1P22309 533 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 UGT1A4P22310 534 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 UGT1A3P35503 534 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 UGT1A5P35504 534 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ZNF789Q5FWF6 425 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 CDK15Q96Q40 435 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 SQORQ9Y6N5 450 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ECI2O75521 394 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 IL1BP01584 269 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ABCB1P08183 1280 aaPredicted RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 PTGER3P43115 390 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 NRG1Q02297 640 aaPredicted RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 RFTN1Q14699 578 aaPredicted RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 C6orf52Q5T4I8 152 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 GCNT7Q6ZNI0 430 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 RALGPS2Q86X27 583 aaPredicted RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 DHRSXQ8N5I4 330 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.75■□□□□ 0.271e-7■■■■■ 26.9
ATXN2-219ENST00000550104 VPS33AQ96AX1 596 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 AARSD1Q9BTE6 412 aaKnown RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 POLR2AP24928 1970 aaKnown RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 FAM149AA5PLN7 773 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ANKRD66B4E2M5 251 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 PAPSS2O95340 614 aaPredicted RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 MT-ND1P03886 318 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 STC1P52823 247 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 MCCD1P59942 119 aaPredicted RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 NAA20P61599 178 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 AP1S1P61966 158 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 PPP1R3AQ16821 1122 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 TAGAPQ8N103 731 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ADCY4Q8NFM4 1077 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ZIC5Q96T25 663 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 FAM192AQ9GZU8 254 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ZBTB26Q9HCK0 441 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 DDX18Q9NVP1 670 aaKnown RBP16.75■□□□□ 0.27
ATXN2-219ENST00000550104 ETAA1Q9NY74 926 aa16.75■□□□□ 0.27
ATXN2-219ENST00000550104 LIN7AO14910 233 aaPredicted RBP16.74■□□□□ 0.27
ATXN2-219ENST00000550104 COCHO43405 550 aa16.74■□□□□ 0.27
ATXN2-219ENST00000550104 CDH2P19022 906 aaPredicted RBP16.74■□□□□ 0.27
ATXN2-219ENST00000550104 PRIM2P49643 509 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms