RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
TROAP-211ENST00000549891 LPCAT1Q8NF37 534 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 FAM71BQ8TC56 605 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 SMIM14Q96QK8 99 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 BPIFA3Q9BQP9 254 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 ADGRE3Q9BY15 652 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 CARD9Q9H257 536 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 ZNF71Q9NQZ8 489 aaPredicted RBP13.43□□□□□ -0.26
TROAP-211ENST00000549891 IGSF5Q9NSI5 407 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 ANKMY1Q9P2S6 941 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 CPNE7Q9UBL6 633 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 KLHL3Q9UH77 587 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 KCNK6Q9Y257 313 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 KCTD3Q9Y597 815 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 PCDHB3Q9Y5E6 796 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 OAS3Q9Y6K5 1087 aaKnown RBP13.43□□□□□ -0.26
TROAP-211ENST00000549891 MN1Q10571 1320 aaPredicted RBP13.42□□□□□ -0.26
TROAP-211ENST00000549891 A6NCN8 305 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 GPR89AB7ZAQ6 455 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 TOX3O15405 576 aaPredicted RBP13.42□□□□□ -0.26
TROAP-211ENST00000549891 NUAK1O60285 661 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 DLGAP3O95886 979 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 MBD3O95983 291 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 PRLP01236 227 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 NTRK1P04629 796 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 GPR89BP0CG08 455 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 MX2P20592 715 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 IL4RP24394 825 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 STAT5AP42229 794 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 CLCNKAP51800 687 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 DEFB109BQ30KR1 87 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 LACTB2Q53H82 288 aaPredicted RBP13.42□□□□□ -0.26
TROAP-211ENST00000549891 FIGNQ5HY92 759 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 NCBP2-AS2Q69YL0 99 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 TIPARPQ7Z3E1 657 aaKnown RBP13.42□□□□□ -0.26
TROAP-211ENST00000549891 MAP7D3Q8IWC1 876 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 UNC5BQ8IZJ1 945 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 ABHD17AQ96GS6 310 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 TSGA13Q96PP4 275 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 ZNF670Q9BS34 389 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 MLPHQ9BV36 600 aaPredicted RBP13.42□□□□□ -0.26
TROAP-211ENST00000549891 NUP85Q9BW27 656 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 ULBP3Q9BZM4 244 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 THAP2Q9H0W7 228 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 UCK1Q9HA47 277 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 APMAPQ9HDC9 416 aa13.42□□□□□ -0.26
TROAP-211ENST00000549891 CNOT6Q9ULM6 557 aaKnown RBP13.42□□□□□ -0.26
TROAP-211ENST00000549891 NBASA2RRP1 2371 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 A0A1B0GTH6 734 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 FADS2P1A8MWK0 482 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 ANKRD66B4E2M5 251 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 MTA2O94776 668 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 CD48P09326 243 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 OAS2P29728 719 aaKnown RBP13.41□□□□□ -0.26
TROAP-211ENST00000549891 FOXM1Q08050 763 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 DPYSL3Q14195 570 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 PDK2Q15119 407 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 ANO6Q4KMQ2 910 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 C16orf46Q6P387 395 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 CYB5D1Q6P9G0 228 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 TRIM48Q8IWZ4 208 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 KCTD6Q8NC69 237 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 ARRDC2Q8TBH0 407 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 BTBD6Q96KE9 485 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 ZNF830Q96NB3 372 aaPredicted RBP13.41□□□□□ -0.26
TROAP-211ENST00000549891 WDR24Q96S15 920 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 TBC1D10AQ9BXI6 508 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 OSGEPL1Q9H4B0 414 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 RAD18Q9NS91 495 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 PCYT1BQ9Y5K3 369 aaPredicted RBP13.41□□□□□ -0.26
TROAP-211ENST00000549891 RPS6KL1Q9Y6S9 549 aa13.41□□□□□ -0.26
TROAP-211ENST00000549891 SLC25A14O95258 325 aaPredicted RBP13.4□□□□□ -0.26
TROAP-211ENST00000549891 VIPP01282 170 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 C9P02748 559 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 CYP1A2P05177 515 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 AMD1P17707 334 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 XRCC1P18887 633 aaPredicted RBP13.4□□□□□ -0.26
TROAP-211ENST00000549891 ARSEP51690 589 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 UBE2IP63279 158 aaKnown RBP13.4□□□□□ -0.26
TROAP-211ENST00000549891 NIPAL4Q0D2K0 466 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 KLRB1Q12918 225 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 IHHQ14623 411 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 IL11RAQ14626 422 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 QPCTQ16769 361 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 ZNF569Q5MCW4 686 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 PDPK2PQ6A1A2 396 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 C6orf15Q6UXA7 325 aaPredicted RBP13.4□□□□□ -0.26
TROAP-211ENST00000549891 CCNYQ8ND76 341 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 SYN2Q92777 582 aaPredicted RBP13.4□□□□□ -0.26
TROAP-211ENST00000549891 HDAC11Q96DB2 347 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 C9orf72Q96LT7 481 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 ZSCAN5AQ9BUG6 496 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 SPATA16Q9BXB7 569 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 TRIM39Q9HCM9 518 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 PRDM8Q9NQV8 689 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 KLC4Q9NSK0 619 aa13.4□□□□□ -0.26
TROAP-211ENST00000549891 SIDT1Q9NXL6 827 aaKnown RBP13.4□□□□□ -0.26
TROAP-211ENST00000549891 ATXN10Q9UBB4 475 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms