RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TMEM209Q96SK2 561 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 NMUR1Q9HB89 426 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 MCCC2Q9HCC0 563 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CASP8AP2Q9UKL3 1982 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 SMIM31A0A1B0GVY4 71 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 TMEM191CA6NGB0 347 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 SLC38A8A6NNN8 435 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 NR5A2O00482 541 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 PIRO00625 290 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 PAPSS1O43252 624 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 NBNO60934 754 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF623O75123 536 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 MPOP05164 745 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 UNGP13051 313 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 HOXD8P13378 290 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 PSMB4P28070 264 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CASRP41180 1078 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 ELK3P41970 407 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 GPD2P43304 727 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 FAM182AQ5T1J6 154 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 SH3PXD2AQ5TCZ1 1133 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 ZDHHC20Q5W0Z9 365 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 SLC2A7Q6PXP3 512 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 RASGRP3Q8IV61 690 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 PROX1Q92786 737 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 JSRP1Q96MG2 331 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 PAFAH2Q99487 392 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 ACE2Q9BYF1 805 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 LHX5Q9H2C1 402 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 SLC2A4RGQ9NR83 387 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 WASF2Q9Y6W5 498 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 GREB1LQ9C091 1923 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 A0A0A0MRY4 1105 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 NOTOA8MTQ0 251 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 C9IYK1 514 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 RGS14O43566 566 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 DAB1O75553 588 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 USP1O94782 785 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 TFPTP0C1Z6 253 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 COL6A1P12109 1028 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 TNFRSF8P28908 595 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CXCR3P49682 368 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 ATXN1P54253 815 aaKnown RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 GALNT3Q14435 633 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 ITPRIPL2Q3MIP1 535 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 XKR6Q5GH73 641 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 SPANXN3Q5MJ09 141 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CHSY3Q70JA7 882 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 TREML1Q86YW5 311 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CATSPER1Q8NEC5 780 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CYGBQ8WWM9 190 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 MTFMTQ96DP5 389 aaKnown RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 FUBP3Q96I24 572 aaKnown RBP eCLIP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 SPATA13Q96N96 652 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 ABCG8Q9H221 673 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 RAD21L1Q9H4I0 556 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 EFCAB1Q9HAE3 211 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 IL23AQ9NPF7 189 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 CHST7Q9NS84 486 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 ABCB8Q9NUT2 735 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 TDP1Q9NUW8 608 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 MTO1Q9Y2Z2 717 aaKnown RBP8.56□□□□□ -1.04
CLIP1-218ENST00000545889 MYH10P35580 1976 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 MYH15Q9Y2K3 1946 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 NCANO14594 1321 aa8.56□□□□□ -1.04
CLIP1-218ENST00000545889 TM7SF2O76062 418 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 OXSR1O95747 527 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 PAICSP22234 425 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ADRA1BP35368 520 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 WNT3AP56704 352 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 CCSAPQ6IQ19 270 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 IL27RAQ6UWB1 636 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 MICU2Q8IYU8 434 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 SRFBP1Q8NEF9 429 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 OR52K1Q8NGK4 314 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF317Q96PQ6 595 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 HNRNPABQ99729 332 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 GPR62Q9BZJ7 368 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 MCOLN1Q9GZU1 580 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 NKX2-4Q9H2Z4 354 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ZNF780BQ9Y6R6 833 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 FOXO6A8MYZ6 492 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 WARSP23381 471 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 KDELR1P24390 212 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 DLG2Q15700 870 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 FGD3Q5JSP0 725 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 PLEKHA7Q6IQ23 1121 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ENPP7Q6UWV6 458 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 NPNTQ6UXI9 565 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 ADAMTSL2Q86TH1 951 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 CYP4Z2PQ8N1L4 340 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 GPR156Q8NFN8 814 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 SUN5Q8TC36 379 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 C5orf34Q96MH7 638 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 LMAN2LQ9H0V9 348 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 TMPRSS4Q9NRS4 437 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 BRCA1P38398 1863 aaKnown RBP8.55□□□□□ -1.04
CLIP1-218ENST00000545889 YJEFN3A6XGL0 299 aa8.55□□□□□ -1.04
CLIP1-218ENST00000545889 PITPNM1O00562 1244 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms