RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 DTX3LQ8TDB6 740 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 BTN2A2Q8WVV5 523 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 GLYATL1Q969I3 302 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 CFAP36Q96G28 342 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 KLHDC7BQ96G42 594 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 PDXPQ96GD0 296 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 BOCQ9BWV1 1114 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 IRF2BPLQ9H1B7 796 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 TCEAL2Q9H3H9 227 aaPredicted RBP16.15■□□□□ 0.18
LIMS2-217ENST00000545738 SMOXQ9NWM0 555 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 ANKRD6Q9Y2G4 727 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 PCDHGA5Q9Y5G8 931 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 DCHS1Q96JQ0 3298 aa16.15■□□□□ 0.18
LIMS2-217ENST00000545738 SPTY2D1-AS1A0A0U1RR47 76 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 CEACAM5P06731 702 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 MYCLP1P12525 358 aaPredicted RBP16.14■□□□□ 0.17
LIMS2-217ENST00000545738 SSTR1P30872 391 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 HOXD12P35452 270 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 CTSKP43235 329 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 RABIFP47224 123 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 SPEM2Q0P670 501 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 GRIK2Q13002 908 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 EIF2B5Q13144 721 aaKnown RBP16.14■□□□□ 0.17
LIMS2-217ENST00000545738 CUL1Q13616 776 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 NFATC4Q14934 902 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 SF3A2Q15428 464 aaKnown RBP16.14■□□□□ 0.17
LIMS2-217ENST00000545738 DUOXA1Q1HG43 343 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 GPRC6AQ5T6X5 926 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 ZDHHC20Q5W0Z9 365 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 CAPN12Q6ZSI9 719 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 CENPUQ71F23 418 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 SNX20Q7Z614 316 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 IQCHQ86VS3 1027 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 OR6P1Q8NGX9 317 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 LRRC39Q96DD0 335 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 HIC2Q96JB3 615 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 VPS35Q96QK1 796 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 FMO2Q99518 471 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 IL21RQ9HBE5 538 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 KCTD5Q9NXV2 234 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 ZC3H7BQ9UGR2 993 aaKnown RBP16.14■□□□□ 0.17
LIMS2-217ENST00000545738 APPL1Q9UKG1 709 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.14■□□□□ 0.17
LIMS2-217ENST00000545738 FAM169AQ9Y6X4 670 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 FAM186AA6NE01 2351 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 PIKFYVEQ9Y2I7 2098 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 NDC80O14777 642 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 RRP9O43818 475 aaKnown RBP16.14■□□□□ 0.17
LIMS2-217ENST00000545738 C1QAP02745 245 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 GNSP15586 552 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 KIAA1024LP59773 190 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 PRAMEP78395 509 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 ZRANB3Q5FWF4 1079 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 DOK6Q6PKX4 331 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 OR4L1Q8NH43 312 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 OR1E3Q8WZA6 343 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 RAD18Q9NS91 495 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 ATXN10Q9UBB4 475 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 SUSD2Q9UGT4 822 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 ST14Q9Y5Y6 855 aa16.14■□□□□ 0.17
LIMS2-217ENST00000545738 LNP1A1A4G5 178 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 MAGEB16A2A368 324 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 SLC25A14O95258 325 aaPredicted RBP16.13■□□□□ 0.17
LIMS2-217ENST00000545738 ERVK-10P10266 1014 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 MAGEA4P43358 317 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 YPEL5P62699 121 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 LAMB3Q13751 1172 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 SHBQ15464 509 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 DBN1Q16643 649 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 ALG11Q2TAA5 492 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 ZNF789Q5FWF6 425 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 PDPK2PQ6A1A2 396 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 AFTPHQ6ULP2 937 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 MACC1Q6ZN28 852 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 ADGRG6Q86SQ4 1221 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 SERPINA9Q86WD7 417 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 SPNS2Q8IVW8 549 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 RBFAQ8N0V3 343 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 NXPE1Q8N323 547 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 DDHD1Q8NEL9 900 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 TSACCQ96A04 125 aaPredicted RBP16.13■□□□□ 0.17
LIMS2-217ENST00000545738 SGSM3Q96HU1 749 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 PHACTR1Q9C0D0 580 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 LRRC4CQ9HCJ2 640 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 SMYD2Q9NRG4 433 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 PRKAB1Q9Y478 270 aa16.13■□□□□ 0.17
LIMS2-217ENST00000545738 EIF3HO15372 352 aaKnown RBP eCLIP16.12■□□□□ 0.17
LIMS2-217ENST00000545738 SGTAO43765 313 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 OR1I1O60431 355 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 POLBP06746 335 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 HOXC4P09017 264 aaPredicted RBP16.12■□□□□ 0.17
LIMS2-217ENST00000545738 ITGALP20701 1170 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 ACRV1P26436 265 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 TNFRSF8P28908 595 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 CACNG1Q06432 222 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 ITGA9Q13797 1035 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 TCEA2Q15560 299 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 ARMC3Q5W041 872 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 ENPP7Q6UWV6 458 aa16.12■□□□□ 0.17
LIMS2-217ENST00000545738 ZNF547Q8IVP9 402 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms