RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 LSMEM1Q8N8F7 131 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 PIK3C3Q8NEB9 887 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 SPATA22Q8NHS9 363 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 FBXO30Q8TB52 745 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 NSUN6Q8TEA1 469 aaKnown RBP12.61□□□□□ -0.39
SMG8-202ENST00000543872 ATG4CQ96DT6 458 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 ZHX1-C8orf76Q96EF9 292 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 HSFY1Q96LI6 401 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 CLSTN3Q9BQT9 956 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 AMBRA1Q9C0C7 1298 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 FBXO8Q9NRD0 319 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 SNTG2Q9NY99 539 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 ANGPTL3Q9Y5C1 460 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 U3KQV3 271 aa12.61□□□□□ -0.39
SMG8-202ENST00000543872 LRRC14BA6NHZ5 514 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 BBIP1A8MTZ0 92 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 SPATA31C2B4DYI2 1134 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 SLC1A7O00341 560 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 MTRF1O75570 445 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 DBTP11182 482 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 CLK1P49759 484 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 UGP2Q16851 508 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 UBE2Q1Q7Z7E8 422 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 BRSK1Q8TDC3 778 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 ZNF560Q96MR9 790 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 MID1IP1Q9NPA3 183 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 NRBP2Q9NSY0 501 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 INTS7Q9NVH2 962 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 SPEF1Q9Y4P9 236 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 PCDHA9Q9Y5H5 950 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 FER1L6Q2WGJ9 1857 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 FAM172BPA6NC97 362 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 SIX3O95343 332 aaPredicted RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 FADS2O95864 444 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 KPNA2P52292 529 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 P2RX3P56373 397 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 CHRNB3Q05901 458 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 ZCCHC8Q6NZY4 707 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 ELMOD2Q8IZ81 293 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 IPMKQ8NFU5 416 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 OR6B3Q8NGW1 331 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 FAR1Q8WVX9 515 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 BTN2A3PQ96KV6 586 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 CDT1Q9H211 546 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 DOCK5Q9H7D0 1870 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 ARID2Q68CP9 1835 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 GABARAPO95166 117 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 FTH1P02794 183 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 STAG3L1P0CL83 205 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 CYP2B6P20813 491 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 IL12AP29459 219 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 SLC1A2P43004 574 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 FOXA1P55317 472 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 KCNK10P57789 538 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 TRIP4Q15650 581 aaPredicted RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 ZNF789Q5FWF6 425 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 NEK5Q6P3R8 708 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 LSM14AQ8ND56 463 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 ITFG1Q8TB96 612 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 FRS2Q8WU20 508 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 LGALS12Q96DT0 336 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 YME1L1Q96TA2 773 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 MRPL45Q9BRJ2 306 aaKnown RBP12.6□□□□□ -0.39
SMG8-202ENST00000543872 SP140LQ9H930 580 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 CYP3A43Q9HB55 503 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 C12orf4Q9NQ89 552 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 PLSCR3Q9NRY6 295 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 USP3Q9Y6I4 520 aa12.6□□□□□ -0.39
SMG8-202ENST00000543872 PSME4Q14997 1843 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
SMG8-202ENST00000543872 CPB1P15086 417 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 FMO4P31512 558 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 CHRNEQ04844 493 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 AGAP9Q5VTM2 703 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 DYNC2LI1Q8TCX1 351 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 TRAPPC12Q8WVT3 735 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 TTYH2Q9BSA4 534 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 DNAJC15Q9Y5T4 150 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 CRCPO75575 148 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 CYP4B1P13584 511 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 ERCC2P18074 760 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 KCNC1P48547 511 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 DNAJB13P59910 316 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 PPP2R2BQ00005 443 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 CDC20Q12834 499 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 NPTX1Q15818 432 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 SYT16Q17RD7 645 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 TECRLQ5HYJ1 363 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 BNIPLQ7Z465 357 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 STON2Q8WXE9 905 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 CELF6Q96J87 481 aaKnown RBP12.59□□□□□ -0.39
SMG8-202ENST00000543872 TEX37Q96LM6 180 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 PPM1MQ96MI6 270 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 GSTO2Q9H4Y5 243 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 IGSF5Q9NSI5 407 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 NSMCE4AQ9NXX6 385 aa12.59□□□□□ -0.39
SMG8-202ENST00000543872 OAS3Q9Y6K5 1087 aaKnown RBP12.59□□□□□ -0.39
SMG8-202ENST00000543872 CENPXA8MT69 81 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms