RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 STYXQ8WUJ0 223 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 BHMTQ93088 406 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 COX4I2Q96KJ9 171 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 COQ7Q99807 217 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PDCD10Q9BUL8 212 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 KCNN2Q9H2S1 579 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 MRPL39Q9NYK5 338 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PADI2Q9Y2J8 665 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TJP1Q07157 1748 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TIAM2Q8IVF5 1701 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 DHRS12A0PJE2 317 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 BTN3A1O00481 513 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 KLF11O14901 512 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 SLC22A3O75751 556 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CDK4P11802 303 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 OR1E1P30953 314 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CPA2P48052 419 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CENPAP49450 140 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 RHBDL3P58872 404 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 FMO1Q01740 532 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ELP6Q0PNE2 266 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TUBA3EQ6PEY2 450 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 SCIMPQ6UWF3 145 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PACS2Q86VP3 889 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 COLGALT2Q8IYK4 626 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 GRIN3AQ8TCU5 1115 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 NMD3Q96D46 503 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TMCO6Q96DC7 493 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CPB2Q96IY4 423 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CLPTM1LQ96KA5 538 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 S100A13Q99584 98 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 REXO4Q9GZR2 422 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 C6orf62Q9GZU0 229 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 MAFFQ9ULX9 164 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TEX46H3BTG2 121 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 SNPHO15079 494 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 LSM1O15116 133 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 GATBO75879 557 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PIGNO95427 931 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CDH5P33151 784 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 FOXK2Q01167 660 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TRAM1Q15629 374 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 LY6KQ17RY6 165 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 SETMARQ53H47 684 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 KLHL26Q53HC5 615 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 NEPROQ6NW34 567 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 KCNT2Q6UVM3 1135 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 IFNEQ86WN2 208 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 DENND6AQ8IWF6 608 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 DEFB106AQ8N104 65 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 GOLM1Q8NBJ4 401 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CDC6Q99741 560 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ARL15Q9NXU5 204 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 KIAA1522Q9P206 1035 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 DKK3Q9UBP4 350 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CFHP08603 1231 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ACSM2AQ08AH3 577 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ACSM2BQ68CK6 577 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 MON1BQ7L1V2 547 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 THAP5Q7Z6K1 395 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PLCZ1Q86YW0 608 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 LIX1Q8N485 282 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TTLQ8NG68 377 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 KAT2BQ92831 832 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TNFRSF25Q93038 417 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 DNAJC19Q96DA6 116 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 RDH12Q96NR8 316 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 NUAK2Q9H093 628 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 UBE2ZQ9H832 354 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 EXD2Q9NVH0 621 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 SMPD4Q9NXE4 827 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PCDHGB7Q9Y5F8 929 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ROBO1Q9Y6N7 1651 aa7.77□□□□□ -1.16
VPS13D-211ENST00000543710 LRRC14BA6NHZ5 514 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SYN3O14994 580 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 MRPS14O60783 128 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 NTRK1P04629 796 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 GSTM1P09488 218 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SNHG28P0DPA3 235 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 OR1D2P34982 312 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 GSTM4Q03013 218 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 LLGL1Q15334 1064 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 NDUFA9Q16795 377 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 KLHL22Q53GT1 634 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 ZC3H12AQ5D1E8 599 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 CCNYL2Q5T2Q4 361 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 LAYNQ6UX15 382 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TAF8Q7Z7C8 310 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 OR4A15Q8NGL6 344 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SLC38A3Q99624 504 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 NECTIN3Q9NQS3 549 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TAS2R7Q9NYW3 318 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 MTRRQ9UBK8 725 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 IRAK3Q9Y616 596 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 TAF6LQ9Y6J9 622 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 PRORSD1PA6NEY8 169 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 H0YC42 278 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 DHX15O43143 795 aaKnown RBP7.77□□□□□ -1.17
VPS13D-211ENST00000543710 SUV39H1O43463 412 aa7.77□□□□□ -1.17
VPS13D-211ENST00000543710 KERAO60938 352 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms