RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ANKRD7Q92527 254 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF75CPQ92670 426 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 HIST1H2ACQ93077 130 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 REXO5Q96IC2 774 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 LMLNQ96KR4 655 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 FBXL18Q96ME1 805 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 C16orf70Q9BSU1 422 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 AARSD1Q9BTE6 412 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 BTBD1Q9H0C5 482 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 SNX15Q9NRS6 342 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ACAD8Q9UKU7 415 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ADGRA3Q8IWK6 1321 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TCRBV9S1A1TA0A576 114 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 MTMR11A4FU01 709 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 CHURC1-FNTBB4DL54 471 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 GTPBP1O00178 669 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 E2F3O00716 465 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 DEAF1O75398 565 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 KRT33AO76009 404 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 NR2F1P10589 423 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 CDKN2BP42772 138 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 GPD2P43304 727 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 GRIA4P48058 902 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 GATMP50440 423 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 CYP4F2P78329 520 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 UBE3AQ05086 875 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 FOXM1Q08050 763 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 SPIRE1Q08AE8 756 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TUBA3EQ6PEY2 450 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 GPR180Q86V85 440 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 COMMD2Q86X83 199 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 FAM20CQ8IXL6 584 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 SPATA22Q8NHS9 363 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 GTPBP2Q9BX10 602 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 SPATA7Q9P0W8 599 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 CORO2BQ9UQ03 480 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 URB1O60287 2271 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 MTX2O75431 263 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 VNN1O95497 513 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 TSPAN8P19075 237 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 FASP25445 335 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ITPRIPL2Q3MIP1 535 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 CASP12Q6UXS9 341 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 PACS1Q6VY07 963 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ADGRG2Q8IZP9 1017 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 SPATA6LQ8N4H0 392 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 C2orf73Q8N5S3 287 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 RDH11Q8TC12 318 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 CLEC4CQ8WTT0 213 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF514Q96K75 400 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 WDR26Q9H7D7 661 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 DNAJC11Q9NVH1 559 aa6.86□□□□□ -1.31
SRGAP1-206ENST00000543397 EIF4E1BA6NMX2 242 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CLDN4O14493 209 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SOCS7O14512 581 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 PPEF2O14830 753 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 KRT75O95678 551 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TMEM11P17152 192 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 NAE1Q13564 534 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 LSM12Q3MHD2 195 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 GPAT3Q53EU6 434 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TMEM220Q6QAJ8 160 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 DHFR2Q86XF0 187 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 LIX1LQ8IVB5 337 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CMTR2Q8IYT2 770 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 CMTM8Q8IZV2 173 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 EID3Q8N140 333 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 NTAN1Q96AB6 310 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 RAD51AP1Q96B01 352 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 OXNAD1Q96HP4 312 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 BTBD9Q96Q07 612 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 BDH2Q9BUT1 245 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 UGT2B28Q9BY64 529 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 PNPLA8Q9NP80 782 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 GDAP2Q9NXN4 497 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 HMGXB4Q9UGU5 601 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 MRTO4Q9UKD2 239 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 PSMD13Q9UNM6 376 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 PPIEQ9UNP9 301 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF142P52746 1687 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ILVBLA1L0T0 632 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 NEMP2A6NFY4 417 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TNFRSF10BO14763 440 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 PMM2O15305 246 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC25A12O75746 678 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SLC35G6P0C7Q6 338 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 HAPLN1P10915 354 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 HGFP14210 728 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF3P17036 446 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 POLD2P49005 469 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 PRKG2Q13237 762 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TDGQ13569 410 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TSC22D1Q15714 1073 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SAMD4BQ5PRF9 694 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 UBXN11Q5T124 520 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ZNF776Q68DI1 518 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 ESRP1Q6NXG1 681 aaKnown RBP6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 SCIMPQ6UWF3 145 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 TMEM26Q6ZUK4 368 aa6.85□□□□□ -1.31
SRGAP1-206ENST00000543397 FUKQ8N0W3 1084 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms