RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 NDNQ99608 321 aa27.61■■■□□ 2.01
CCM2-218ENST00000541586 UPK3BL1B0FP48 263 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 UPK3BL2E5RIL1 263 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 C7P10643 843 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 BPIP17213 487 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 PGGT1BP53609 377 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 ZRANB3Q5FWF4 1079 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 PSAPL1Q6NUJ1 521 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 PIANPQ8IYJ0 282 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 EPN3Q9H201 632 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 FAM96AQ9H5X1 160 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 PCDH12Q9NPG4 1184 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 INTS10Q9NVR2 710 aaKnown RBP27.6■■■□□ 2.01
CCM2-218ENST00000541586 DCDC2Q9UHG0 476 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 ITM2BQ9Y287 266 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 CRYL1Q9Y2S2 319 aa27.6■■■□□ 2.01
CCM2-218ENST00000541586 SCN8AQ9UQD0 1980 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 CCDC163A0A0D9SF12 145 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 SRRM3A6NNA2 597 aaPredicted RBP27.59■■■□□ 2.01
CCM2-218ENST00000541586 GLRA3O75311 464 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 DHRS4L1P0CG22 281 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 POU4F1Q01851 419 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 PTSQ03393 145 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 MAP7D1Q3KQU3 841 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 RAPH1Q70E73 1250 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 WDR5BQ86VZ2 330 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 CEP97Q8IW35 865 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 SCG3Q8WXD2 468 aaKnown RBP27.59■■■□□ 2.01
CCM2-218ENST00000541586 TCF12Q99081 682 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 FZD4Q9ULV1 537 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 NUMA1Q14980 2115 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 KMT2EQ8IZD2 1858 aa27.59■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3DA0A087WVF3 549 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3IA0A087WXS9 549 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3EA0A087X179 549 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3KA0A087X1G2 549 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 IGHV1OR15-9A0A0B4J2B8 117 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3FA6NER0 549 aaPredicted RBP27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3LB9A6J9 549 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 GAPDHSO14556 408 aaPredicted RBP27.58■■■□□ 2.01
CCM2-218ENST00000541586 PHGDHO43175 533 aaKnown RBP27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3HP0C7X1 549 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 STMN1P16949 149 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 CD6P30203 668 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 OXTRP30559 389 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 TAS2R39P59534 338 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 RAB10P61026 200 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 SRSF5Q13243 272 aaKnown RBP27.58■■■□□ 2.01
CCM2-218ENST00000541586 ZKSCAN8Q15776 578 aaPredicted RBP27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3GQ6DHY5 549 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3CQ6IPX1 549 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 FAM151BQ6UXP7 276 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 TBC1D3Q8IZP1 549 aaPredicted RBP27.58■■■□□ 2.01
CCM2-218ENST00000541586 SPACA7Q96KW9 195 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 IL26Q9NPH9 171 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 SLC30A1Q9Y6M5 507 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 GMNCA6NCL1 334 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 MAP3K13O43283 966 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 PCDH8O95206 1070 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 ADPRHP54922 357 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 IRF9Q00978 393 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 CACNG1Q06432 222 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 ILF2Q12905 390 aaKnown RBP27.58■■■□□ 2.01
CCM2-218ENST00000541586 INSCQ1MX18 579 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 ERAP2Q6P179 960 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 CBARPQ8N350 705 aaPredicted RBP27.58■■■□□ 2.01
CCM2-218ENST00000541586 DEFB119Q8N690 84 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 MAGEB18Q96M61 343 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 RABEP2Q9H5N1 569 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 TLK1Q9UKI8 766 aa27.58■■■□□ 2.01
CCM2-218ENST00000541586 GPR39O43194 453 aa27.57■■■□□ 2
CCM2-218ENST00000541586 NDUFS2O75306 463 aa27.57■■■□□ 2
CCM2-218ENST00000541586 SRP72O76094 671 aaKnown RBP27.57■■■□□ 2
CCM2-218ENST00000541586 SLC35E2BP0CK96 405 aa27.57■■■□□ 2
CCM2-218ENST00000541586 CYP2A6P11509 494 aaPredicted RBP27.57■■■□□ 2
CCM2-218ENST00000541586 VIPR1P32241 457 aa27.57■■■□□ 2
CCM2-218ENST00000541586 NUBP1P53384 320 aa27.57■■■□□ 2
CCM2-218ENST00000541586 TAS2R38P59533 333 aa27.57■■■□□ 2
CCM2-218ENST00000541586 ZNF460Q14592 562 aa27.57■■■□□ 2
CCM2-218ENST00000541586 HECTD2Q5U5R9 776 aa27.57■■■□□ 2
CCM2-218ENST00000541586 ZNF549Q6P9A3 640 aa27.57■■■□□ 2
CCM2-218ENST00000541586 CLEC14AQ86T13 490 aa27.57■■■□□ 2
CCM2-218ENST00000541586 PLD6Q8N2A8 252 aaKnown RBP27.57■■■□□ 2
CCM2-218ENST00000541586 ZNF317Q96PQ6 595 aaPredicted RBP27.57■■■□□ 2
CCM2-218ENST00000541586 OLFM1Q99784 485 aa27.57■■■□□ 2
CCM2-218ENST00000541586 GPR174Q9BXC1 333 aa27.57■■■□□ 2
CCM2-218ENST00000541586 SGK2Q9HBY8 427 aa27.57■■■□□ 2
CCM2-218ENST00000541586 WSB2Q9NYS7 404 aaPredicted RBP27.57■■■□□ 2
CCM2-218ENST00000541586 APPL1Q9UKG1 709 aa27.57■■■□□ 2
CCM2-218ENST00000541586 EMCNQ9ULC0 261 aa27.57■■■□□ 2
CCM2-218ENST00000541586 CORO1CQ9ULV4 474 aaPredicted RBP27.57■■■□□ 2
CCM2-218ENST00000541586 FADS3Q9Y5Q0 445 aa27.57■■■□□ 2
CCM2-218ENST00000541586 H0Y858 1186 aa27.56■■■□□ 2
CCM2-218ENST00000541586 NDUFS3O75489 264 aa27.56■■■□□ 2
CCM2-218ENST00000541586 PRAMEF1O95521 474 aa27.56■■■□□ 2
CCM2-218ENST00000541586 C1SP09871 688 aa27.56■■■□□ 2
CCM2-218ENST00000541586 NFKBIAP25963 317 aa27.56■■■□□ 2
CCM2-218ENST00000541586 CRABP2P29373 138 aa27.56■■■□□ 2
CCM2-218ENST00000541586 SPAM1P38567 509 aa27.56■■■□□ 2
CCM2-218ENST00000541586 TTPAP49638 278 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms