RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 IGSF11Q5DX21 431 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TCTE1Q5JU00 501 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 FAM90A2PQ658T7 463 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ARHGAP17Q68EM7 881 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3GQ6DHY5 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 VASNQ6EMK4 673 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3CQ6IPX1 549 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 CCDC144NLQ6NUI1 221 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 NOTUMQ6P988 496 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 GALNT18Q6P9A2 607 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 GJB7Q6PEY0 223 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 LYPD4Q6UWN0 246 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 CLEC17AQ6ZS10 378 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TAS2R42Q7RTR8 314 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 GPRIN1Q7Z2K8 1008 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 CLEC14AQ86T13 490 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 AMZ2Q86W34 360 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 DDIASQ8IXT1 998 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ZNF679Q8IYX0 411 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TBC1D3Q8IZP1 549 aaPredicted RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 DTX3Q8N9I9 347 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 OCC1Q8TAD7 63 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 DNAJB14Q8TBM8 379 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 CHURC1Q8WUH1 139 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 NSMCE1Q8WV22 266 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ASB11Q8WXH4 323 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 LPGAT1Q92604 370 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 NPIPB3Q92617 1050 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 GTF3C6Q969F1 213 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 SCARF2Q96GP6 870 aaPredicted RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 LRRC3BQ96PB8 259 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 HNRNPABQ99729 332 aaKnown RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 NPLQ9BXD5 320 aaPredicted RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 RTN4RQ9BZR6 473 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ECT2Q9H8V3 914 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ANKZF1Q9H8Y5 726 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 FAM212BQ9NTI7 297 aaPredicted RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 SETD4Q9NVD3 440 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 FBXO28Q9NVF7 368 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 P4HTMQ9NXG6 502 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ETAA1Q9NY74 926 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 IL1RAPL1Q9NZN1 696 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 PEMTQ9UBM1 199 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 IPO11Q9UI26 975 aaKnown RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 MBD1Q9UIS9 605 aaPredicted RBP5.54□□□□□ -1.52
DDB1-219ENST00000541513 HAO1Q9UJM8 370 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 PLAGL1Q9UM63 463 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 VWA7Q9Y334 891 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 MAB21L2Q9Y586 359 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 TAF6LQ9Y6J9 622 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 MAST2Q6P0Q8 1798 aa5.54□□□□□ -1.52
DDB1-219ENST00000541513 ZNF541Q9H0D2 1346 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 COL1A1P02452 1464 aaPredicted RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 LNP1A1A4G5 178 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 C5orf52A6NGY3 159 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 GLTPD2A6NH11 291 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 TBKBP1A7MCY6 615 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 AGPSO00116 658 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 BIN1O00499 593 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 SOCS6O14544 535 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 PPEF2O14830 753 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 NMT2O60551 498 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 TACC1O75410 805 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 IDH1O75874 414 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 CDKL5O76039 1030 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 SEC31AO94979 1220 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 CELF2O95319 508 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 SLC16A8O95907 504 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 LMNAP02545 664 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 FGBP02675 491 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 AMHP03971 560 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 UQCRFS1P1P0C7P4 283 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 THRBP10828 461 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 HGFP14210 728 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 AREGP15514 252 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 SFPQP23246 707 aaKnown RBP eCLIP5.53□□□□□ -1.52
DDB1-219ENST00000541513 RPS12P25398 132 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 ADORA1P30542 326 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 NTSR1P30989 418 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 FMO4P31512 558 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 CCR1P32246 355 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 TAGLN2P37802 199 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 CASRP41180 1078 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 FRKP42685 505 aaPredicted RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 VPS41P49754 854 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 CLCNKAP51800 687 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 ADCY7P51828 1080 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 PDE1AP54750 535 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 VCPP55072 806 aaKnown RBP5.53□□□□□ -1.52
DDB1-219ENST00000541513 FOXL2P58012 376 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 CYP4F8P98187 520 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 ACY1Q03154 408 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 DUSP2Q05923 314 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 CCDC173Q0VFZ6 552 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 ABRQ12979 859 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 TRAF1Q13077 416 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 OLIG2Q13516 323 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 RAB3GAP1Q15042 981 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 TAZQ16635 292 aa5.53□□□□□ -1.52
DDB1-219ENST00000541513 P3H1Q32P28 736 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms