RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 RSPO4Q2I0M5 234 aaPredicted RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 PRRT3Q5FWE3 981 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 AARS2Q5JTZ9 985 aaKnown RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 TPRG1LQ5T0D9 272 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 AFTPHQ6ULP2 937 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 CERS6Q6ZMG9 384 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 ZNF534Q76KX8 674 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 CAND1Q86VP6 1230 aaKnown RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 NAXDQ8IW45 347 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 PDIK1LQ8N165 341 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 ZNF548Q8NEK5 533 aaPredicted RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 OR13C4Q8NGS5 318 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 OR2I1PQ8NGU4 316 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 GDAP1Q8TB36 358 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 LRRC39Q96DD0 335 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 DNAJC1Q96KC8 554 aaKnown RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 SERPINB12Q96P63 405 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 GSDMCQ9BYG8 508 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 CYP4F12Q9HCS2 524 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 FGF22Q9HCT0 170 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 PIH1D1Q9NWS0 290 aaKnown RBP18.6■□□□□ 0.57
VPS33A-205ENST00000541169 DLL3Q9NYJ7 618 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 FKBPLQ9UIM3 349 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 SOX13Q9UN79 622 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 KCTD3Q9Y597 815 aa18.6■□□□□ 0.57
VPS33A-205ENST00000541169 KNL1Q8NG31 2342 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 TCRBV7S3A2A0A539 114 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 CFAP99D6REC4 459 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 LMO7DNF2Z398 122 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 GAPDHSO14556 408 aaPredicted RBP18.59■□□□□ 0.57
VPS33A-205ENST00000541169 TM4SF5O14894 197 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 ZNF500O60304 480 aaPredicted RBP18.59■□□□□ 0.57
VPS33A-205ENST00000541169 KCNJ13O60928 360 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 TMEM63AO94886 807 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 PRAMEF14Q5SWL7 426 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 ANKRD22Q5VYY1 191 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 HIBCHQ6NVY1 386 aaPredicted RBP18.59■□□□□ 0.57
VPS33A-205ENST00000541169 C8orf74Q6P047 294 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 KANSL1Q7Z3B3 1105 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 PIP4P1Q86T03 277 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 GALNT13Q8IUC8 556 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 MMGT1Q8N4V1 131 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 GABPB2Q8TAK5 448 aaPredicted RBP18.59■□□□□ 0.57
VPS33A-205ENST00000541169 SETD7Q8WTS6 366 aaKnown RBP18.59■□□□□ 0.57
VPS33A-205ENST00000541169 OR1E3Q8WZA6 343 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 GLMNQ92990 594 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 TSACCQ96A04 125 aaPredicted RBP18.59■□□□□ 0.57
VPS33A-205ENST00000541169 FAM129AQ9BZQ8 928 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 CARS2Q9HA77 564 aaKnown RBP18.59■□□□□ 0.57
VPS33A-205ENST00000541169 CRLS1Q9UJA2 301 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 MOSPD1Q9UJG1 213 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 ANAPC5Q9UJX4 755 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 GPR34Q9UPC5 381 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 DOLKQ9UPQ8 538 aa18.59■□□□□ 0.57
VPS33A-205ENST00000541169 DNMT3AQ9Y6K1 912 aaPredicted RBP18.59■□□□□ 0.57
VPS33A-205ENST00000541169 COL5A1P20908 1838 aaPredicted RBP18.58■□□□□ 0.57
VPS33A-205ENST00000541169 WDR87Q6ZQQ6 2873 aa18.58■□□□□ 0.57
VPS33A-205ENST00000541169 FAM237BA0A1B0GVD1 139 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 QSOX1O00391 747 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 CHUKO15111 745 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 PFDN6O15212 129 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 NUAK1O60285 661 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 CDK14O94921 469 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 TTC4O95801 387 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 ANXA6P08133 673 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 CEACAM1P13688 526 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 MGAT1P26572 445 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 MC4RP32245 332 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 TMEM115Q12893 351 aaPredicted RBP18.58■□□□□ 0.56
VPS33A-205ENST00000541169 CBLBQ13191 982 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 CCDC38Q502W7 563 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 PYCR3Q53H96 274 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 CASC4Q6P4E1 433 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 RD3Q7Z3Z2 195 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 NXPE1Q8N323 547 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 MPP5Q8N3R9 675 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 SLC25A45Q8N413 288 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 OR13J1Q8NGT2 312 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 OR4C6Q8NH72 309 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 LMX1AQ8TE12 382 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 RHBDD1Q8TEB9 315 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 PDXPQ96GD0 296 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 DCUN1D1Q96GG9 259 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 OR2M4Q96R27 311 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 LRRC61Q9BV99 259 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 CHRAC1Q9NRG0 131 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 TREX1Q9NSU2 369 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 KLF15Q9UIH9 416 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 SUFUQ9UMX1 484 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 LRP4O75096 1905 aa18.58■□□□□ 0.56
VPS33A-205ENST00000541169 TRBV5-4A0A0C4DH59 114 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 KMOO15229 486 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 RAD51CO43502 376 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 DNAJC6O75061 913 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 GSTM1P09488 218 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 VCLP18206 1134 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 MSH3P20585 1137 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 ARL4CP56559 192 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 GSTM4Q03013 218 aa18.57■□□□□ 0.56
VPS33A-205ENST00000541169 BNIP3Q12983 259 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms