RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SMARCE1Q969G3 411 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 RRP36Q96EU6 259 aaKnown RBP3.45□□□□□ -1.86
MDM2-227ENST00000540709 TMEM68Q96MH6 324 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 GFRA4Q9GZZ7 299 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 PAIP1Q9H074 479 aaKnown RBP3.45□□□□□ -1.86
MDM2-227ENST00000540709 TRPC7Q9HCX4 862 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 PTTG2Q9NZH5 202 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 CNOT8Q9UFF9 292 aaKnown RBP3.45□□□□□ -1.86
MDM2-227ENST00000540709 OR14J1Q9UGF5 321 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 NAALADL1Q9UQQ1 740 aa3.45□□□□□ -1.86
MDM2-227ENST00000540709 TAF1P21675 1872 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 DUXAA6NLW8 204 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 ERI2A8K979 691 aaKnown RBP3.44□□□□□ -1.86
MDM2-227ENST00000540709 BLOC1S5-TXNDC5H3BN57 136 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 NR3C1P04150 777 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 PAX1P15863 534 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 AHRP35869 848 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 APOBEC1P41238 236 aaKnown RBP3.44□□□□□ -1.86
MDM2-227ENST00000540709 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 GAGE5Q13069 117 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 GAGE6Q13070 117 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 PDE1CQ14123 709 aaPredicted RBP3.44□□□□□ -1.86
MDM2-227ENST00000540709 DHX8Q14562 1220 aaKnown RBP3.44□□□□□ -1.86
MDM2-227ENST00000540709 WDR38Q5JTN6 314 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 C15orf39Q6ZRI6 1047 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 PLEKHM3Q6ZWE6 761 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 NRROSQ86YC3 692 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 THAP6Q8TBB0 222 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 PHF21AQ96BD5 680 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 OXNAD1Q96HP4 312 aaPredicted RBP3.44□□□□□ -1.86
MDM2-227ENST00000540709 NEUROD6Q96NK8 337 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 PSMD1Q99460 953 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 LITAFQ99732 161 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 PIP5K1AQ99755 562 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 SEMA3CQ99985 751 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 BRF2Q9HAW0 419 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 SLC52A3Q9NQ40 469 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 R3HDM2Q9Y2K5 976 aaKnown RBP3.44□□□□□ -1.86
MDM2-227ENST00000540709 MAU2Q9Y6X3 613 aa3.44□□□□□ -1.86
MDM2-227ENST00000540709 A0A1B0GU03 582 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 A0A1W2PQM1 296 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 OR5K3A6NET4 321 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 EIF4E1BA6NMX2 242 aaKnown RBP3.43□□□□□ -1.86
MDM2-227ENST00000540709 HHLA1C9JL84 531 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 TMEM178BH3BS89 294 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 CLIC2O15247 247 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 KCNN4O15554 427 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 CTSVO60911 334 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 INHBAP08476 426 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 SPARCP09486 303 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 PATE4P0C8F1 98 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 RNF224P0DH78 156 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 UBA1P22314 1058 aaKnown RBP3.43□□□□□ -1.86
MDM2-227ENST00000540709 ARL1P40616 181 aaPredicted RBP3.43□□□□□ -1.86
MDM2-227ENST00000540709 FASLGP48023 281 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 F2RL1P55085 397 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 CD81P60033 236 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 TMEM115Q12893 351 aaPredicted RBP3.43□□□□□ -1.86
MDM2-227ENST00000540709 OLIG2Q13516 323 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 ACVR2BQ13705 512 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 PRICKLE4Q2TBC4 344 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 CXorf66Q5JRM2 361 aaPredicted RBP3.43□□□□□ -1.86
MDM2-227ENST00000540709 PIWIL4Q7Z3Z4 852 aaKnown RBP3.43□□□□□ -1.86
MDM2-227ENST00000540709 ARMC8Q8IUR7 673 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 PAF1Q8N7H5 531 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 ADAD2Q8NCV1 583 aaKnown RBP3.43□□□□□ -1.86
MDM2-227ENST00000540709 ZUFSPQ96AP4 578 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 SCRN2Q96FV2 425 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 PPP1R13BQ96KQ4 1090 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 PSD2Q9BQI7 771 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 RANBP17Q9H2T7 1088 aaKnown RBP3.43□□□□□ -1.86
MDM2-227ENST00000540709 SAGE1Q9NXZ1 904 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 DLGAP2Q9P1A6 1054 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 COPG2Q9UBF2 871 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 STK39Q9UEW8 545 aa3.43□□□□□ -1.86
MDM2-227ENST00000540709 A0A0G2JLW4 131 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 CTAGE9A4FU28 777 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 FAM90A26D6RGX4 464 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 EIF3JO75822 258 aaKnown RBP3.42□□□□□ -1.86
MDM2-227ENST00000540709 CTAGE8P0CG41 777 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 UBL4AP11441 157 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 CSF2RAP15509 400 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 HOXC9P31274 260 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 DCTP40126 519 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 UBA7P41226 1012 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 MLLT10P55197 1068 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 DPCR1Q3MIW9 517 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 CDONQ4KMG0 1287 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 ASPRV1Q53RT3 343 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 ARHGAP17Q68EM7 881 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 SDCCAG8Q86SQ7 713 aaPredicted RBP3.42□□□□□ -1.86
MDM2-227ENST00000540709 TRPT1Q86TN4 253 aaKnown RBP3.42□□□□□ -1.86
MDM2-227ENST00000540709 LONP2Q86WA8 852 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 CTAGE4Q8IX94 777 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 SMAP1Q8IYB5 467 aaPredicted RBP3.42□□□□□ -1.86
MDM2-227ENST00000540709 GBGT1Q8N5D6 347 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 RBM15BQ8NDT2 890 aaKnown RBP3.42□□□□□ -1.86
MDM2-227ENST00000540709 KCNG4Q8TDN1 519 aa3.42□□□□□ -1.86
MDM2-227ENST00000540709 MORC4Q8TE76 937 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms