RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 SNX2O60749 519 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PRAMEF10O60809 474 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 SLC25A14O95258 325 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PRB1P04280 392 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ZNF8P17098 575 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 NFKB1P19838 968 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 MPSTP25325 297 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PPM1FP49593 454 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 MAPK10P53779 464 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 BPTFQ12830 3046 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 TMEM159Q96B96 161 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CCDC74BQ96LY2 380 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PANX2Q96RD6 677 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 RMI1Q9H9A7 625 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 BPIFA1Q9NP55 256 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 LUC7LQ9NQ29 371 aaKnown RBP18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 TBC1D29Q9UFV1 150 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 FAM153AQ9UHL3 310 aa18.87■□□□□ 0.61
TNFRSF1A-212ENST00000539372 IGHV1OR21-1A0A087WYE8 117 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ATXN7O15265 892 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 NUAK1O60285 661 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 NDUFA10O95299 355 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 BPIP17213 487 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CSF2RBP32927 897 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 WNT3AP56704 352 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 DCDC1P59894 354 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CFHR1Q03591 330 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 VAC14Q08AM6 782 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CRTC3Q6UUV7 619 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 KDELC1Q6UW63 502 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ZNF567Q8N184 647 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 SFRP1Q8N474 314 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 SLC25A41Q8N5S1 370 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 TRAM1L1Q8N609 369 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 SLC39A7Q92504 469 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 USP7Q93009 1102 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 RBM41Q96IZ5 413 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 QKIQ96PU8 341 aaKnown RBP eCLIP18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 SLC38A3Q99624 504 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ZSCAN5AQ9BUG6 496 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ZMYND15Q9H091 742 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CARD9Q9H257 536 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 C10orf88Q9H8K7 445 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 RAD18Q9NS91 495 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 FOXJ2Q9P0K8 574 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 TMEM9Q9P0T7 183 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 SSUH2Q9Y2M2 353 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 EPN1Q9Y6I3 576 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 DUSP10Q9Y6W6 482 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ATRXP46100 2492 aa18.86■□□□□ 0.61
TNFRSF1A-212ENST00000539372 MTSS1O43312 755 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 MTX2O75431 263 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CCL4P13236 92 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CHRNA4P43681 627 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 FASLGP48023 281 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 NAP1L1P55209 391 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 NFATC2Q13469 925 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 TGIF1Q15583 401 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PLA2G4EQ3MJ16 856 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PID1Q7Z2X4 250 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ADGRG6Q86SQ4 1221 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 HTR3CQ8WXA8 447 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 GLYATL1Q969I3 302 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 OXNAD1Q96HP4 312 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 TRIM39Q9HCM9 518 aa18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 AKAP7Q9P0M2 348 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF1A-212ENST00000539372 SCN8AQ9UQD0 1980 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 LOC285095A0A1B0GVY8 99 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 H7C0C1 242 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 NVLO15381 856 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ATP5OP48047 213 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 LIMK2P53671 638 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 HHEXQ03014 270 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PPP2R5EQ16537 467 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CLPPQ16740 277 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 SIRPB2Q5JXA9 342 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CCDC181Q5TID7 509 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 IYDQ6PHW0 289 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 RAD9BQ6WBX8 426 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 CCDC81Q6ZN84 652 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 BBS12Q6ZW61 710 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 TMTC1Q8IUR5 882 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PHYKPLQ8IUZ5 450 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 IPMKQ8NFU5 416 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 OR4D9Q8NGE8 314 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 AHCYL2Q96HN2 611 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 MRGPRX2Q96LB1 330 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 FCRL5Q96RD9 977 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 HERPUD2Q9BSE4 406 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 OSGEPL1Q9H4B0 414 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 PRDM8Q9NQV8 689 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 KLC4Q9NSK0 619 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 NFKBIL1Q9UBC1 381 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 REXO2Q9Y3B8 237 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ADGRG1Q9Y653 693 aa18.84■□□□□ 0.61
TNFRSF1A-212ENST00000539372 ZFC3H1O60293 1989 aaKnown RBP18.83■□□□□ 0.61
TNFRSF1A-212ENST00000539372 A6NCN8 305 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 HACD1B0YJ81 288 aa18.83■□□□□ 0.6
TNFRSF1A-212ENST00000539372 C9orf172C9J069 976 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms