RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ALG11Q2TAA5 492 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 MYLK3Q32MK0 819 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 SLC9B1Q4ZJI4 515 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 LRRC8DQ7L1W4 858 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 ZNF440Q8IYI8 595 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 ZBTB10Q96DT7 871 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 POM121L2Q96KW2 1035 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 SLC25A10Q9UBX3 287 aaPredicted RBP4.64□□□□□ -1.67
CCDC7-209ENST00000539197 ACAD8Q9UKU7 415 aa4.64□□□□□ -1.67
CCDC7-209ENST00000539197 MRPS28Q9Y2Q9 187 aaKnown RBP4.64□□□□□ -1.67
CCDC7-209ENST00000539197 A0A1W2PPI3 338 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 HS3ST1O14792 307 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 HOXB5P09067 269 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 PSMC2P35998 433 aaKnown RBP4.63□□□□□ -1.67
CCDC7-209ENST00000539197 NR2C2P49116 596 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 ACVR2BQ13705 512 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 KIR2DS3Q14952 304 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 USP41Q3LFD5 358 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 CACNA2D4Q7Z3S7 1137 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 DDHD1Q8NEL9 900 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 ABHD8Q96I13 439 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 PSD2Q9BQI7 771 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 LRMDAQ9H2I8 198 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 RPS10P5Q9NQ39 176 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 RASAL2Q9UJF2 1139 aa4.63□□□□□ -1.67
CCDC7-209ENST00000539197 PDE9AO76083 593 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 NR3C1P04150 777 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 COX7A2P14406 83 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 DPEP1P16444 411 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 APOBEC1P41238 236 aaKnown RBP4.62□□□□□ -1.67
CCDC7-209ENST00000539197 UBE3AQ05086 875 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 MBTD1Q05BQ5 628 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 ATG9AQ7Z3C6 839 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 P2RY8Q86VZ1 359 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 FAM222BQ8WU58 562 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 DNAAF4Q8WXU2 420 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 ZSCAN31Q96LW9 406 aaPredicted RBP4.62□□□□□ -1.67
CCDC7-209ENST00000539197 ZBTB20Q9HC78 741 aaPredicted RBP4.62□□□□□ -1.67
CCDC7-209ENST00000539197 RIC8AQ9NPQ8 531 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 KLHL9Q9P2J3 617 aa4.62□□□□□ -1.67
CCDC7-209ENST00000539197 H7C423 109 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 SYNCRIPO60506 623 aaKnown RBP4.61□□□□□ -1.67
CCDC7-209ENST00000539197 KRT9P35527 623 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 MRPS5P82675 430 aaKnown RBP4.61□□□□□ -1.67
CCDC7-209ENST00000539197 FGFBP1Q14512 234 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 ZNF239Q16600 458 aaKnown RBP4.61□□□□□ -1.67
CCDC7-209ENST00000539197 C6orf141Q5SZD1 244 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 ANKRD52Q8NB46 1076 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 PHF21AQ96BD5 680 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 VGLL1Q99990 258 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 RAD21L1Q9H4I0 556 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 TRPC7Q9HCX4 862 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 AAR2Q9Y312 384 aaKnown RBP4.61□□□□□ -1.67
CCDC7-209ENST00000539197 PYGO1Q9Y3Y4 419 aa4.61□□□□□ -1.67
CCDC7-209ENST00000539197 CCDC194A0A1B0GVG4 234 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 A0A1W2PP11 408 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 OR5K3A6NET4 321 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 TTC36A6NLP5 189 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 USP17L23D6RBM5 183 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 TMEM178BH3BS89 294 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 WISP2O76076 250 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 MSH3P20585 1137 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.6□□□□□ -1.67
CCDC7-209ENST00000539197 TUBB2AQ13885 445 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 METTL7BQ6UX53 244 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 PLXDC2Q6UX71 529 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 DPPA4Q7L190 304 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 NKAPQ8N5F7 415 aaKnown RBP4.6□□□□□ -1.67
CCDC7-209ENST00000539197 RDM1Q8NG50 284 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 FGFBP3Q8TAT2 258 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 ZCCHC10Q8TBK6 192 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 HERVK_113Q902F9 699 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 ACOX2Q99424 681 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 TRIM51Q9BSJ1 452 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 MCRIP2Q9BUT9 160 aaKnown RBP4.6□□□□□ -1.67
CCDC7-209ENST00000539197 TUBB2BQ9BVA1 445 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 BARHL2Q9NY43 387 aa4.6□□□□□ -1.67
CCDC7-209ENST00000539197 A6NL46 340 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 TNPO2O14787 897 aaKnown RBP4.59□□□□□ -1.67
CCDC7-209ENST00000539197 ANKRD28O15084 1053 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 HMGB1P09429 215 aaKnown RBP4.59□□□□□ -1.67
CCDC7-209ENST00000539197 CEACAM1P13688 526 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 NR2F2P24468 414 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 UBA7P41226 1012 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 MAD2L1Q13257 205 aaPredicted RBP4.59□□□□□ -1.67
CCDC7-209ENST00000539197 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 KRTCAP3Q53RY4 240 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 IGSF8Q969P0 613 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 OXNAD1Q96HP4 312 aaPredicted RBP4.59□□□□□ -1.67
CCDC7-209ENST00000539197 RBM4BQ9BQ04 359 aaKnown RBP4.59□□□□□ -1.67
CCDC7-209ENST00000539197 TMEM47Q9BQJ4 181 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 PCGF1Q9BSM1 259 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 SLC6A13Q9NSD5 602 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 DISP3Q9P2K9 1392 aa4.59□□□□□ -1.67
CCDC7-209ENST00000539197 MEIOCA2RUB1 952 aa4.58□□□□□ -1.68
CCDC7-209ENST00000539197 FAM90A26D6RGX4 464 aa4.58□□□□□ -1.68
CCDC7-209ENST00000539197 SLC22A2O15244 555 aa4.58□□□□□ -1.68
CCDC7-209ENST00000539197 KCNN4O15554 427 aa4.58□□□□□ -1.68
CCDC7-209ENST00000539197 DCXO43602 365 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms