RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 BRAFP15056 766 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 PAMP19021 973 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 HNRNPA2B1P22626 353 aaKnown RBP17.11■□□□□ 0.33
CLN6-202ENST00000538696 NUDT1P36639 197 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 GP5P40197 560 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 ACVR1Q04771 509 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 SIM2Q14190 667 aaPredicted RBP17.11■□□□□ 0.33
CLN6-202ENST00000538696 HENMT1Q5T8I9 393 aaKnown RBP17.11■□□□□ 0.33
CLN6-202ENST00000538696 DENND6BQ8NEG7 585 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 MDM1Q8TC05 714 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 PEX13Q92968 403 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 CENPTQ96BT3 561 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 AP2M1Q96CW1 435 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 SERAC1Q96JX3 654 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 ZC3H10Q96K80 434 aaKnown RBP17.11■□□□□ 0.33
CLN6-202ENST00000538696 LENG8Q96PV6 779 aaPredicted RBP17.11■□□□□ 0.33
CLN6-202ENST00000538696 PLEKHG4BQ96PX9 1271 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 CPNE1Q99829 537 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 C19orf43Q9BQ61 176 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 RIOK2Q9BVS4 552 aaKnown RBP17.11■□□□□ 0.33
CLN6-202ENST00000538696 C1QTNF7Q9BXJ2 289 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 FAM83DQ9H4H8 585 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 RAD18Q9NS91 495 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 ADAM21Q9UKJ8 722 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 DMTF1Q9Y222 760 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 CA5BQ9Y2D0 317 aa17.11■□□□□ 0.33
CLN6-202ENST00000538696 FNDC3AQ9Y2H6 1198 aaKnown RBP17.11■□□□□ 0.33
CLN6-202ENST00000538696 GON4LQ3T8J9 2241 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 K7ESM1 405 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 SPAG7O75391 227 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 KRT37O76014 449 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 KRT38O76015 456 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 SOD1P00441 154 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 MT-ND3P03897 115 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 CD27P26842 260 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 MAOBP27338 520 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 ABCG1P45844 678 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 DHPSP49366 369 aaPredicted RBP17.1■□□□□ 0.33
CLN6-202ENST00000538696 XIAPP98170 497 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 MPP1Q00013 466 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 DPTQ07507 201 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 PEX6Q13608 980 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 THOC5Q13769 683 aaKnown RBP17.1■□□□□ 0.33
CLN6-202ENST00000538696 LRRC14Q15048 493 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 ZDHHC20Q5W0Z9 365 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 LYSMD4Q5XG99 296 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 FAM151BQ6UXP7 276 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 GCNT7Q6ZNI0 430 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 PRR23BQ6ZRT6 265 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 STRA8Q7Z7C7 330 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 CNTN4Q8IWV2 1026 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 TMEM145Q8NBT3 493 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 PLA2G15Q8NCC3 412 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 DNASE2BQ8WZ79 361 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 CDKN2AIPNLQ96HQ2 116 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 TBATAQ96M53 351 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 SLC6A18Q96N87 628 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 IL26Q9NPH9 171 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 SENP1Q9P0U3 644 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 EIF2B4Q9UI10 523 aaKnown RBP17.1■□□□□ 0.33
CLN6-202ENST00000538696 SDK1Q7Z5N4 2213 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 CACNA1HO95180 2353 aa17.1■□□□□ 0.33
CLN6-202ENST00000538696 LRP4O75096 1905 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 ATXN2Q99700 1313 aaKnown RBP17.09■□□□□ 0.33
CLN6-202ENST00000538696 GLYATL1P3A0A0U1RQE8 302 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 TMEM120BA0PK00 339 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 OR51F1A6NGY5 319 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 FADS2P1A8MWK0 482 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 PRAMEF26H0Y7S4 382 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 H7C0S8 307 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 GOLGA8RI6L899 631 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 RHOBTB1O94844 696 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 AKT2P31751 481 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 HADHAP40939 763 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 CLDN2P57739 230 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 MPP2Q14168 576 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 GRTP1Q5TC63 336 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 LGSNQ5TDP6 509 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 MROH9Q5TGP6 573 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 RAET1GQ6H3X3 334 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 ZC3H14Q6PJT7 736 aaKnown RBP17.09■□□□□ 0.33
CLN6-202ENST00000538696 DENND6AQ8IWF6 608 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 TRAM1L1Q8N609 369 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 HDAC10Q969S8 669 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 RBBP8Q99708 897 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 FAM167BQ9BTA0 163 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 CDH19Q9H159 772 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 SUDS3Q9H7L9 328 aaPredicted RBP17.09■□□□□ 0.33
CLN6-202ENST00000538696 CNOT10Q9H9A5 744 aaKnown RBP17.09■□□□□ 0.33
CLN6-202ENST00000538696 KCNK9Q9NPC2 374 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 KCTD5Q9NXV2 234 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 TXNDC16Q9P2K2 825 aa17.09■□□□□ 0.33
CLN6-202ENST00000538696 CCDC162PA2VCL2 907 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 H0Y8X5 98 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 GPR39O43194 453 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 PRAMEF1O95521 474 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 ITGA2BP08514 1039 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 CHN1P15882 459 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 ITPKAP23677 461 aa17.08■□□□□ 0.32
CLN6-202ENST00000538696 CNTFP26441 200 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms