RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 HTRA4P83105 476 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 NHLH1Q02575 133 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 TRAF2Q12933 501 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 ZNF177Q13360 481 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 PDAP1Q13442 181 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 TRIP10Q15642 601 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 PPP1R3AQ16821 1122 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 INO80DQ53TQ3 878 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 TCEAL5Q5H9L2 206 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 ADGRF1Q5T601 910 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 OGFOD2Q6N063 350 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 GLT6D1Q7Z4J2 308 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 RAB44Q7Z6P3 723 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 DENND1CQ8IV53 801 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 FUNDC1Q8IVP5 155 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 FAM217AQ8IXS0 508 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 NKAPQ8N5F7 415 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 TMEM102Q8N9M5 508 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 CATSPER1Q8NEC5 780 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 OR4K2Q8NGD2 314 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 STAG3L4Q8TBR4 150 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 SP7Q8TDD2 431 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 ZNF483Q8TF39 744 aaPredicted RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 ASB9Q96DX5 294 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 IGSF21Q96ID5 467 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 ZFRQ96KR1 1074 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 C3orf30Q96M34 536 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 KLHL32Q96NJ5 620 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 BIRC8Q96P09 236 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 TRAPPC9Q96Q05 1148 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 DDX50Q9BQ39 737 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 C19orf43Q9BQ61 176 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 NUSAP1Q9BXS6 441 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 MRPL1Q9BYD6 325 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 SCUBE2Q9NQ36 999 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 TAS2R13Q9NYV9 303 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 TRPM5Q9NZQ8 1165 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 LMCD1Q9NZU5 365 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 DLGAP2Q9P1A6 1054 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 TMEM181Q9P2C4 612 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 CNOT11Q9UKZ1 510 aaKnown RBP9.19□□□□□ -0.94
DDB1-211ENST00000538280 VPS9D1Q9Y2B5 631 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 DTNAQ9Y4J8 743 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 YIPF1Q9Y548 306 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 OR51B4Q9Y5P0 310 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 DNAJC15Q9Y5T4 150 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 COMMD10Q9Y6G5 202 aa9.19□□□□□ -0.94
DDB1-211ENST00000538280 ABHD14A-ACY1A0A1B0GW23 586 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 LRRC14BA6NHZ5 514 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 EIF4E1BA6NMX2 242 aaKnown RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 C2orf81A6NN90 581 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 E7ENX8 843 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 MRASO14807 208 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 DENRO43583 198 aaKnown RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 NRP2O60462 931 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 GREM1O60565 184 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 VPS4BO75351 444 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 GPC4O75487 556 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 ECI2O75521 394 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 SRP72O76094 671 aaKnown RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 RHOBTB1O94844 696 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 TSPAN12O95859 305 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 OLFM2O95897 454 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 SOD2P04179 222 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 LINC00271P0C7V0 271 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 PKMP14618 531 aaKnown RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 PAX7P23759 505 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 MRPS22P82650 360 aaKnown RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 ZP2Q05996 745 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 RAD51Q06609 339 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 GRIK2Q13002 908 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 LCP2Q13094 533 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 TRIM25Q14258 630 aaKnown RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 PABPC1LQ4VXU2 614 aaKnown RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 AGKQ53H12 422 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 COQ5Q5HYK3 327 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 CTSL3PQ5NE16 218 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 RNF219Q5W0B1 726 aaPredicted RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 CLEC6AQ6EIG7 209 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 TXNDC11Q6PKC3 985 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 PAOXQ6QHF9 649 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 PAQR3Q6TCH7 311 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 LILRA2Q8N149 483 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 MARVELD2Q8N4S9 558 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 HIPK4Q8NE63 616 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 BHLHE22Q8NFJ8 381 aaPredicted RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 ADCY4Q8NFM4 1077 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 ZNF461Q8TAF7 563 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 RIN3Q8TB24 985 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 PIP4K2CQ8TBX8 421 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 TSPEARQ8WU66 669 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 TWIST2Q8WVJ9 160 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 USP13Q92995 863 aaPredicted RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 ROPN1LQ96C74 230 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 SPDL1Q96EA4 605 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 ALG14Q96F25 216 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 DCUN1D1Q96GG9 259 aa9.18□□□□□ -0.94
DDB1-211ENST00000538280 ZNF512Q96ME7 567 aaPredicted RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 GPATCH1Q9BRR8 931 aaKnown RBP9.18□□□□□ -0.94
DDB1-211ENST00000538280 SPON2Q9BUD6 331 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms