RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 EEF1AKMT1Q8WVE0 214 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 PPP2R3CQ969Q6 453 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 ACDQ96AP0 544 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 LINGO1Q96FE5 620 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 MYO19Q96H55 970 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 PDLIM5Q96HC4 596 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 GPR63Q9BZJ6 419 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 GEMIN8Q9NWZ8 242 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 LSM7Q9UK45 103 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 EIF4E1BA6NMX2 242 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 E7ENX8 843 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 TRIM24O15164 1050 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 HTRA2O43464 458 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 SMAD6O43541 496 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 VPS4BO75351 444 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 CHRM3P20309 590 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 PEX2P28328 305 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 MSX2P35548 267 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 HK3P52790 923 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 SLC7A9P82251 487 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 TRIP10Q15642 601 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 SFT2D3Q587I9 215 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 UGT3A1Q6NUS8 523 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 PAOXQ6QHF9 649 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 CERS6Q6ZMG9 384 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 LYSMD3Q7Z3D4 306 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 GPSM1Q86YR5 675 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 CAMK1DQ8IU85 385 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 TMEM126BQ8IUX1 230 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 PCDH20Q8N6Y1 951 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 RNF148Q8N7C7 305 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 OR9I1Q8NGQ6 314 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 GRIN3AQ8TCU5 1115 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 ASB9Q96DX5 294 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 KCNA7Q96RP8 456 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 NUSAP1Q9BXS6 441 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 LRRC3Q9BY71 257 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 ADA2Q9NZK5 511 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 SUCOQ9UBS9 1254 aaKnown RBP11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 PCTPQ9UKL6 214 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 ZNF510Q9Y2H8 683 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 DHRS7Q9Y394 339 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 PCDHB1Q9Y5F3 818 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 SLC30A1Q9Y6M5 507 aa11.33□□□□□ -0.6
SLC28A1-204ENST00000538177 LTBP2Q14767 1821 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 A0A1B0GTL3 188 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 MAGEA13PA6NCF6 341 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 BBIP1A8MTZ0 92 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 PRMT5O14744 637 aaPredicted RBP11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 MRASO14807 208 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 MLYCDO95822 493 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 CTPS1P17812 591 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 LBPP18428 481 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 GABRR2P28476 465 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 MAPK8P45983 427 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 AGTR2P50052 363 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 CLCN7P51798 805 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 MRPS22P82650 360 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 CREMQ03060 361 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 TRIM25Q14258 630 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 GRB7Q14451 532 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 GEN1Q17RS7 908 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 TMEM154Q6P9G4 183 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 EFL1Q7Z2Z2 1120 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 BHLHE22Q8NFJ8 381 aaPredicted RBP11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 DDI1Q8WTU0 396 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 MRPS31Q92665 395 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.32□□□□□ -0.61e-7■■■■■ 35.3
SLC28A1-204ENST00000538177 ROPN1LQ96C74 230 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 TM6SF2Q9BZW4 377 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 SEMA4BQ9NPR2 832 aaPredicted RBP11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 CD300AQ9UGN4 299 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 CROTQ9UKG9 612 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 ATP11BQ9Y2G3 1177 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 FNDC3AQ9Y2H6 1198 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 PTGDR2Q9Y5Y4 395 aa11.32□□□□□ -0.6
SLC28A1-204ENST00000538177 E5RI56 91 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 MATN4O95460 622 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 ESRRBO95718 433 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 ALPIP09923 528 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 RPS3P23396 243 aaKnown RBP eCLIP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 PPM1AP35813 382 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 WDR5P61964 334 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CYP4F8P98187 520 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 BCL2L1Q07817 233 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 TRAP1Q12931 704 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CDKN3Q16667 212 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 LRRC36Q1X8D7 754 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 MPPE1Q53F39 396 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 OGFOD2Q6N063 350 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 DDIASQ8IXT1 998 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 CPNE9Q8IYJ1 553 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 SNX31Q8N9S9 440 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 BHMTQ93088 406 aa11.31□□□□□ -0.6
SLC28A1-204ENST00000538177 VCXQ9H320 206 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms