RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 DENND1BQ6P3S1 775 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 BNIPLQ7Z465 357 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 SVOPQ8N4V2 548 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TRPV3Q8NET8 790 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 RASSF5Q8WWW0 418 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 HERVK_113Q902F9 699 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 ST8SIA2Q92186 375 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TRMT61AQ96FX7 289 aaKnown RBP10.63□□□□□ -0.71
RTN3-208ENST00000537981 GPR78Q96P69 363 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 NODALQ96S42 347 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 ZNF700Q9H0M5 742 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 MMP28Q9H239 520 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TASP1Q9H6P5 420 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 SRA1Q9HD15 236 aaKnown RBP10.63□□□□□ -0.71
RTN3-208ENST00000537981 OSGIN1Q9UJX0 560 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 UTS2RQ9UKP6 389 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TBC1D24Q9ULP9 559 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 DAGLAQ9Y4D2 1042 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 IPPQ9Y573 584 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TTC24A2A3L6 582 aaPredicted RBP10.63□□□□□ -0.71
RTN3-208ENST00000537981 OR5K3A6NET4 321 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 FXYD1O00168 92 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 SLC1A7O00341 560 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 RPS6KA4O75676 772 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 GRAP2O75791 330 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 PRKD3O94806 890 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 PSMB9P28065 219 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 RARRES1P49788 294 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 AP2S1P53680 142 aaPredicted RBP10.63□□□□□ -0.71
RTN3-208ENST00000537981 RHAGQ02094 409 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 CNTN2Q02246 1040 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TARDBPQ13148 414 aaKnown RBP eCLIP10.63□□□□□ -0.71
RTN3-208ENST00000537981 ZNF181Q2M3W8 571 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 SYCE2Q6PIF2 218 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 SCARA5Q6ZMJ2 495 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 STRA8Q7Z7C7 330 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 CLEC14AQ86T13 490 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 P2RY8Q86VZ1 359 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TBC1D21Q8IYX1 336 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TCAIMQ8N3R3 496 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 NIPA2Q8N8Q9 360 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 OR5B17Q8NGF7 314 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 LRRC20Q8TCA0 184 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 ZFPM2Q8WW38 1151 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 YIPF6Q96EC8 236 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 MBOAT4Q96T53 435 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 FEM1AQ9BSK4 669 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 WASH6PQ9NQA3 447 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TAS2R9Q9NYW1 312 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 CPSF3Q9UKF6 684 aaKnown RBP10.63□□□□□ -0.71
RTN3-208ENST00000537981 USP18Q9UMW8 372 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 SCN4AP35499 1836 aa10.63□□□□□ -0.71
RTN3-208ENST00000537981 TCRBV5S2A0A599 114 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 ISPDA4D126 451 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 PLK4O00444 970 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 DLX3O60479 287 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 TRUB2O95900 331 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 CFBP00751 764 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 PGK2P07205 417 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 SNRPB2P08579 225 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 TGM2P21980 687 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 FMO3P31513 532 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 ST13P50502 369 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 ARSFP54793 590 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 DAB2P98082 770 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 INCA1Q0VD86 236 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 EFR3AQ14156 821 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 PARP15Q460N3 678 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 WDR44Q5JSH3 913 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 SHEQ5VZ18 495 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 FAM122CQ6P4D5 195 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 CFAP161Q6P656 301 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 VN1R5Q7Z5H4 357 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 STK32CQ86UX6 486 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 AMIGO1Q86WK6 493 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 ZNF557Q8N988 423 aaPredicted RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 TMEM161BQ8NDZ6 487 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 RDH11Q8TC12 318 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 GTF3C2Q8WUA4 911 aaPredicted RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 KCTD4Q8WVF5 259 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 TRIM63Q969Q1 353 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 LGALS12Q96DT0 336 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 TMEM74Q96NL1 305 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 FTHL17Q9BXU8 183 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 YTHDF1Q9BYJ9 559 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 ZFP14Q9HCL3 533 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 POLR3BQ9NW08 1133 aaPredicted RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 VANGL2Q9ULK5 521 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 SCML1Q9UN30 329 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 CNTNAP4Q9C0A0 1308 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 CCDC154A6NI56 674 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 NR5A2O00482 541 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 SLC22A2O15244 555 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 CYP7B1O75881 506 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 FADS2O95864 444 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 C4BPAP04003 597 aaKnown RBP10.62□□□□□ -0.71
RTN3-208ENST00000537981 ALPLP05186 524 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 KRT7P08729 469 aa10.62□□□□□ -0.71
RTN3-208ENST00000537981 CNTFP26441 200 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms