RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 DOCK9Q9BZ29 2069 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 UBA6A0AVT1 1052 aaPredicted RBP15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 LRRC72A6NJI9 287 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 TRIM49D1C9J1S8 452 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 H3BQF6 201 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 AXIN1O15169 862 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 RGS16O15492 202 aaPredicted RBP15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 NDUFS3O75489 264 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 FSBPO95073 299 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 SAT1P21673 171 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 FMO4P31512 558 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 IGFALSP35858 605 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 GPR1P46091 355 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 DPTQ07507 201 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 SFSWAPQ12872 951 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 SGCGQ13326 291 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 LRRC14Q15048 493 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 GRTP1Q5TC63 336 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 TRIM69Q86WT6 500 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 SLC41A1Q8IVJ1 513 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 LMNTD2Q8IXW0 634 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 DCLK2Q8N568 766 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 CLDN19Q8N6F1 224 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 GPATCH11Q8N954 259 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 CENPTQ96BT3 561 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 SERAC1Q96JX3 654 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 IER2Q9BTL4 223 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 ZSCAN5AQ9BUG6 496 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 KDM4CQ9H3R0 1056 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 RHOJQ9H4E5 214 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 RAD18Q9NS91 495 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 OAS3Q9Y6K5 1087 aaKnown RBP15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 SLCO1B1Q9Y6L6 691 aa15.52■□□□□ 0.07
SFSWAP-206ENST00000537582 FAM86C2PA6NEL3 165 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 ZNF217O75362 1048 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 TDGF1P13385 188 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 CREB1P16220 341 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 BCKDHBP21953 392 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 MAGEA9P43362 315 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 FNTBP49356 437 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 TTPAP49638 278 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 CSE1LP55060 971 aaKnown RBP15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 CLDN2P57739 230 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 PPARDQ03181 441 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 ITGA9Q13797 1035 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 ZNF460Q14592 562 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 INPP5AQ14642 412 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 AGERQ15109 404 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 RASA2Q15283 850 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 GPR33Q49SQ1 333 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 CTSL3PQ5NE16 218 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 PNCKQ6P2M8 343 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 NEK5Q6P3R8 708 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 DET1Q7L5Y6 550 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 CMC1Q7Z7K0 106 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 GDAP1Q8TB36 358 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 BTN2A2Q8WVV5 523 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 GLYATL1Q969I3 302 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 BIRC7Q96CA5 298 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 BIRC8Q96P09 236 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 OLFM1Q99784 485 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 LGR4Q9BXB1 951 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 CDH19Q9H159 772 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 PRMT8Q9NR22 394 aaPredicted RBP15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 SMOXQ9NWM0 555 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 NSMCE4AQ9NXX6 385 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 OR1A2Q9Y585 309 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 TRPM6Q9BX84 2022 aa15.51■□□□□ 0.07
SFSWAP-206ENST00000537582 FAM95CA0A1B0GW59 222 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 IQCF5A8MTL0 148 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 H0Y8X5 98 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 GOLGA8RI6L899 631 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 ALDOAP04075 364 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 OXTRP30559 389 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 SPRP35270 261 aaPredicted RBP15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 CDKN2DP55273 166 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 TNFAIP8L3Q5GJ75 292 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 AARS2Q5JTZ9 985 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 KIAA0895LQ68EN5 471 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 MAMSTRQ6ZN01 415 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 PIM3Q86V86 326 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 HEATR4Q86WZ0 1026 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 RAVER1Q8IY67 606 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 LKAAEAR1Q8TD35 194 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 PGM2Q96G03 612 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 ELMO2Q96JJ3 720 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 TCF12Q99081 682 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 GPR22Q99680 433 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 P2RY12Q9H244 342 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 ACBD3Q9H3P7 528 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 PPCSQ9HAB8 311 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 INTS10Q9NVR2 710 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 ZDHHC3Q9NYG2 299 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 GALPQ9UBC7 116 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 SLC39A10Q9ULF5 831 aa15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 NOVA2Q9UNW9 492 aaKnown RBP15.5■□□□□ 0.07
SFSWAP-206ENST00000537582 GOLGA6L10A6NI86 522 aa15.49■□□□□ 0.07
SFSWAP-206ENST00000537582 TPP1O14773 563 aa15.49■□□□□ 0.07
SFSWAP-206ENST00000537582 LATO43561 262 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms