RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HOXD3P31249 432 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 BTDP43251 543 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 GNAQP50148 359 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 PGGT1BP53609 377 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ZBED6P86452 979 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ROR2Q01974 943 aaKnown RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 AIMP2Q13155 320 aaKnown RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 OLIG2Q13516 323 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 PTGR1Q14914 329 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 PPP2R5BQ15173 497 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 DNTTIP2Q5QJE6 756 aaKnown RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 BEND3Q5T5X7 828 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 DAB2IPQ5VWQ8 1189 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 PAPD7Q5XG87 772 aaKnown RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 MZT2BQ6NZ67 158 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 CDC73Q6P1J9 531 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 MON1BQ7L1V2 547 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 GPAT4Q86UL3 456 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 HEATR4Q86WZ0 1026 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 TICAM1Q8IUC6 712 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ADHFE1Q8IWW8 467 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 TEX11Q8IYF3 940 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ADSSL1Q8N142 457 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ZCCHC9Q8N567 271 aaKnown RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 PDILTQ8N807 584 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 SCCPDHQ8NBX0 429 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 MCPH1Q8NEM0 835 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 KLHDC9Q8NEP7 349 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 CMASQ8NFW8 434 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ARNTL2Q8WYA1 636 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ARHGEF2Q92974 986 aaKnown RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ZBTB10Q96DT7 871 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF570Q96NI8 536 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 SPATC1LQ9H0A9 340 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ISCUQ9H1K1 167 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 UBE2ZQ9H832 354 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 BPIFA1Q9NP55 256 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 SPAG4Q9NPE6 437 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 EIF2B3Q9NR50 452 aaKnown RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ASAH2Q9NR71 780 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 PLK2Q9NYY3 685 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 NCKIPSDQ9NZQ3 722 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 AASSQ9UDR5 926 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 AAR2Q9Y312 384 aaKnown RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 Q9Y3F1 56 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 BRWD1Q9NSI6 2320 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 COL11A1P12107 1806 aaPredicted RBP3.39□□□□□ -1.87
SNHG1-202ENST00000535689 ZNF236Q9UL36 1845 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 MROH7-TTC4A0A0A0MT08 1334 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 FANCIQ9NVI1 1328 aa3.39□□□□□ -1.87
SNHG1-202ENST00000535689 CACNA1BQ00975 2339 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 FAM186AA6NE01 2351 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 ZFHX2Q9C0A1 2572 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 C5orf42Q9H799 3197 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 FSD2A1L4K1 749 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 AKR1B15C9JRZ8 316 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 GTPBP1O00178 669 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 TAF4O00268 1085 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 SCAMP1O15126 338 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 HNRNPCL1O60812 293 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 EIF5BO60841 1220 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 MOSPD3O75425 235 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 NDUFS3O75489 264 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 RNASEH2AO75792 299 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 CIAO1O76071 339 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 OAZ2O95190 189 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 IPO7O95373 1038 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 BMP15O95972 392 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 TOP3BO95985 862 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 PGK1P00558 417 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 CD4P01730 458 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 CLEC3BP05452 202 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 URODP06132 367 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 CA3P07451 260 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 CTPS1P17812 591 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 TNFAIP3P21580 790 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 RRM1P23921 792 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 NFKBIAP25963 317 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 TNFSF8P32971 234 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 IL15P40933 162 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 POLD2P49005 469 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 SETQ01105 290 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 ZBTB16Q05516 673 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 DCTN2Q13561 401 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 ITGA7Q13683 1181 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 MVPQ14764 893 aaKnown RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 PRICKLE4Q2TBC4 344 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 PRTGQ2VWP7 1150 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 RABL6Q3YEC7 729 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 SYTL3Q4VX76 610 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 HERC4Q5GLZ8 1057 aaPredicted RBP3.38□□□□□ -1.87
SNHG1-202ENST00000535689 FSCBQ5H9T9 825 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 PRAMEF19Q5SWL8 479 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 SLC9C2Q5TAH2 1124 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 SLC16A12Q6ZSM3 486 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 LURAP1LQ8IV03 231 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 SFTPA2Q8IWL1 248 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 HORMAD2Q8N7B1 307 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 LRRC57Q8N9N7 239 aa3.38□□□□□ -1.87
SNHG1-202ENST00000535689 TEX45Q8NA69 505 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms