RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	NDUFAF2	Q8N183	169 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	SFRP1	Q8N474	314 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	TEX26	Q8N6G2	289 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	IL22RA1	Q8N6P7	574 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	PMEPA1	Q969W9	287 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	COX14	Q96I36	57 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	OR2M4	Q96R27	311 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	DNAJC7	Q99615	494 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZPBP	Q9BS86	351 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	ABCG8	Q9H221	673 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	FBXO8	Q9NRD0	319 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	TRMT1	Q9NXH9	659 aa	Known RBP	11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	KCNK4	Q9NYG8	393 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	AIPL1	Q9NZN9	384 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	PILRA	Q9UKJ1	303 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	SCIN	Q9Y6U3	715 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	FLNC	Q14315	2725 aa		11.47	□□□□□ -0.57
CTNND1-238	ENST00000534647	SDK2	Q58EX2	2172 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZNF891	A8MT65	544 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	KIF2A	O00139	706 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	IPO7	O95373	1038 aa	Known RBP	11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	MYBL1	P10243	752 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	LIF	P15018	202 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	CES1	P23141	567 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	MAP4	P27816	1152 aa	Known RBP	11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	IL1R2	P27930	398 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	PRKCI	P41743	596 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	MMP13	P45452	471 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	GPR1	P46091	355 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	CCR10	P46092	362 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	POLE2	P56282	527 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	DENND2C	Q68D51	928 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	TSPAN33	Q86UF1	283 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	NRSN1	Q8IZ57	195 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	OR10G6	Q8NH81	332 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	EXD1	Q8NHP7	514 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	NSMCE1	Q8WV22	266 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	JPH3	Q8WXH2	748 aa	Predicted RBP	11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	AP2M1	Q96CW1	435 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	TRIM11	Q96F44	468 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	CSPG4P5	Q96PW8	444 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	EFHD1	Q9BUP0	239 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	TRIM7	Q9C029	511 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	MRPL47	Q9HD33	250 aa	Known RBP	11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	SARS2	Q9NP81	518 aa	Known RBP	11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	ETNK2	Q9NVF9	386 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	OCIAD1	Q9NX40	245 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	VPS18	Q9P253	973 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	ANAPC2	Q9UJX6	822 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	DNPEP	Q9ULA0	475 aa		11.46	□□□□□ -0.57
CTNND1-238	ENST00000534647	TMCO5B	A8MYB1	307 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	HAX1	O00165	279 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	RAD1	O60671	282 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	TUBB4A	P04350	444 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	PDHA1	P08559	390 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	CCDC175	P0C221	793 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	AMPD1	P23109	780 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	MAN1A1	P33908	653 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	SERPINB6	P35237	376 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	CYLC1	P35663	651 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	CASR	P41180	1078 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	EPHA4	P54764	986 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	MSS51	Q4VC12	460 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	E4F1	Q66K89	784 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	LRRC66	Q68CR7	880 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	IYD	Q6PHW0	289 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	LAPTM4B	Q86VI4	370 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	TEKT4	Q8WW24	435 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	FATE1	Q969F0	183 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	SH3KBP1	Q96B97	665 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	RTP4	Q96DX8	246 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	ISCU	Q9H1K1	167 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	TRIT1	Q9H3H1	467 aa	Known RBP	11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	EPB41L1	Q9H4G0	881 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	HAUS4	Q9H6D7	363 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	TMEM9	Q9P0T7	183 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	CNOT8	Q9UFF9	292 aa	Known RBP	11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	AMACR	Q9UHK6	382 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	TMEM98	Q9Y2Y6	226 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	PLEKHM1	Q9Y4G2	1056 aa		11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.45	□□□□□ -0.58
CTNND1-238	ENST00000534647		A0A0J9YYE9	177 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	CLEC18A	A5D8T8	446 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	LRRC53	A6NM62	1247 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	EFCAB7	A8K855	629 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	DDX3X	O00571	662 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	DUX1	O43812	170 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	DNAJC6	O75061	913 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	TRBC1	P01850	177 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	RARA	P10276	462 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	TNNT1	P13805	278 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	STC1	P52823	247 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	MAX	P61244	160 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	RPL26	P61254	145 aa	Known RBP	11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	ABHD18	Q0P651	414 aa		11.44	□□□□□ -0.58
CTNND1-238	ENST00000534647	MAP7	Q14244	749 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms