RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CYP4F12Q9HCS2 524 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 IL26Q9NPH9 171 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 DUS2Q9NX74 493 aaKnown RBP13.29□□□□□ -0.28
BEST1-208ENST00000534553 CRLS1Q9UJA2 301 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 TSPAN11A1L157 253 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 PER2O15055 1255 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 ARHGEF15O94989 841 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 NFATC1O95644 943 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 LMNAP02545 664 aaKnown RBP13.29□□□□□ -0.28
BEST1-208ENST00000534553 FGF4P08620 206 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 ADH5P11766 374 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 CCND1P24385 295 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 NSG1P42857 185 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 DGKGP49619 791 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 KDSRQ06136 332 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 OR4D1Q15615 310 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 SETMARQ53H47 684 aaPredicted RBP13.29□□□□□ -0.28
BEST1-208ENST00000534553 PTRHD1Q6GMV3 140 aaKnown RBP13.29□□□□□ -0.28
BEST1-208ENST00000534553 CRTC1Q6UUV9 634 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 MACC1Q6ZN28 852 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 RAVER1Q8IY67 606 aaKnown RBP13.29□□□□□ -0.28
BEST1-208ENST00000534553 OR2A12Q8NGT7 310 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 AGR3Q8TD06 166 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 MAPK15Q8TD08 544 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 ACTRT2Q8TDY3 377 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 ZSWIM3Q96MP5 696 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 MEAF6Q9HAF1 191 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 PKD2L2Q9NZM6 624 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 BAIAP2L1Q9UHR4 511 aa13.29□□□□□ -0.28
BEST1-208ENST00000534553 ZNF106Q9H2Y7 1883 aaKnown RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 NPIPB15A6NHN6 443 aaPredicted RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 SUPT3HB4E1H0 165 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 E9PBE3 544 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 EIF3FO00303 357 aaPredicted RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 BTN3A1O00481 513 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 GAPDHSO14556 408 aaPredicted RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 CHUKO15111 745 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 OR1I1O60431 355 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 KLHL41O60662 606 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 NIPSNAP2O75323 286 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 SUPT3HO75486 399 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 TSPAN12O95859 305 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 THRAP10827 490 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 MTHFD2P13995 350 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 MYOGP15173 224 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 GKP32189 559 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 CLCN7P51798 805 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 ST8SIA6P61647 398 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 MXRA7P84157 204 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 CDC16Q13042 620 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 ARHGEF7Q14155 803 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 HERC3Q15034 1050 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 LSM12Q3MHD2 195 aaKnown RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 TTLL9Q3SXZ7 439 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 ZNF697Q5TEC3 545 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 LRRC66Q68CR7 880 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 Q6ZVU0 165 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 EFL1Q7Z2Z2 1120 aaKnown RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 ZSWIM9Q86XI8 627 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 CLYBLQ8N0X4 340 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 NXPE1Q8N323 547 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 CHCHD4Q8N4Q1 142 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 FAM13CQ8NE31 585 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 FUBP1Q96AE4 644 aaKnown RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 LINGO1Q96FE5 620 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 PANX3Q96QZ0 392 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 OR52B2Q96RD2 323 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 BRD9Q9H8M2 597 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 PFDN4Q9NQP4 134 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 GDE1Q9NZC3 331 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 DKK3Q9UBP4 350 aa13.28□□□□□ -0.28
BEST1-208ENST00000534553 FNDC3AQ9Y2H6 1198 aaKnown RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 NUP210Q8TEM1 1887 aaPredicted RBP13.28□□□□□ -0.28
BEST1-208ENST00000534553 RGSL1A5PLK6 1076 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 DCXO43602 365 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 SNX2O60749 519 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 MLYCDO95822 493 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 CYP17A1P05093 508 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 UGT2B4P06133 528 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 HNRNPLP14866 589 aaKnown RBP eCLIP13.27□□□□□ -0.28
BEST1-208ENST00000534553 DGKAP23743 735 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 KCNC1P48547 511 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 RAP1GDS1P52306 607 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 DCDC1P59894 354 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 NAA25Q14CX7 972 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 EIF4HQ15056 248 aaKnown RBP13.27□□□□□ -0.28
BEST1-208ENST00000534553 TSNQ15631 228 aaKnown RBP13.27□□□□□ -0.28
BEST1-208ENST00000534553 PDCD2Q16342 344 aaPredicted RBP13.27□□□□□ -0.28
BEST1-208ENST00000534553 PFKFB4Q16877 469 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 EML3Q32P44 896 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 UNC50Q53HI1 259 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 C6orf163Q5TEZ5 329 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 ANKS6Q68DC2 871 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 RINLQ6ZS11 566 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 RBM23Q86U06 439 aaKnown RBP13.27□□□□□ -0.28
BEST1-208ENST00000534553 SIDT2Q8NBJ9 832 aaKnown RBP13.27□□□□□ -0.28
BEST1-208ENST00000534553 RBM15BQ8NDT2 890 aaKnown RBP13.27□□□□□ -0.28
BEST1-208ENST00000534553 RP9Q8TA86 221 aaKnown RBP13.27□□□□□ -0.28
BEST1-208ENST00000534553 ITFG1Q8TB96 612 aa13.27□□□□□ -0.28
BEST1-208ENST00000534553 BPIFB1Q8TDL5 484 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms