RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 PRKAR1AP10644 381 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 TCF4P15884 667 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 CSTF2P33240 577 aaKnown RBP eCLIP7.97□□□□□ -1.13
LINC00958-207ENST00000534477 MMP13P45452 471 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 CSNK1DP48730 415 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 B4GALNT1Q00973 533 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 ZFP36L1Q07352 338 aaKnown RBP7.97□□□□□ -1.13
LINC00958-207ENST00000534477 KLHL30Q0D2K2 578 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 KRT81Q14533 505 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 RFTN1Q14699 578 aaPredicted RBP7.97□□□□□ -1.13
LINC00958-207ENST00000534477 TBR1Q16650 682 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 ZFYVE27Q5T4F4 411 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 ARMC12Q5T9G4 340 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 OGFOD3Q6PK18 319 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 USP45Q70EL2 814 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 CHSY3Q70JA7 882 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 NRROSQ86YC3 692 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 SLITRK4Q8IW52 837 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 PGBD5Q8N414 524 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 SNRNP27Q8WVK2 155 aaKnown RBP7.97□□□□□ -1.13
LINC00958-207ENST00000534477 ART4Q93070 314 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 DTD2Q96FN9 168 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 BTBD6Q96KE9 485 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 COQ10AQ96MF6 247 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 PSKH2Q96QS6 385 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 OR2M4Q96R27 311 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 CLEC4MQ9H2X3 399 aaPredicted RBP7.97□□□□□ -1.13
LINC00958-207ENST00000534477 NOD2Q9HC29 1040 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 ETNK2Q9NVF9 386 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 TMEM9Q9P0T7 183 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 KLHL3Q9UH77 587 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 GPN3Q9UHW5 284 aaPredicted RBP7.97□□□□□ -1.13
LINC00958-207ENST00000534477 SOX13Q9UN79 622 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 PRKAB1Q9Y478 270 aa7.97□□□□□ -1.13
LINC00958-207ENST00000534477 KALRNO60229 2985 aa7.96□□□□□ -1.13
LINC00958-207ENST00000534477 CFAP69A5D8W1 941 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 TMEM191CA6NGB0 347 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 EFCAB7A8K855 629 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 EIF3CLB5ME19 914 aaKnown RBP7.96□□□□□ -1.14
LINC00958-207ENST00000534477 STMND1H3BQB6 276 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 SNX2O60749 519 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 SOCS5O75159 536 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 MBD3O95983 291 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 FUCA1P04066 466 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 CEACAM5P06731 702 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 PNLIPP16233 465 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 LHCGRP22888 699 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 NFKBIAP25963 317 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 IL1R2P27930 398 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 GMPRP36959 345 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 HSPA9P38646 679 aaKnown RBP7.96□□□□□ -1.14
LINC00958-207ENST00000534477 ADCY8P40145 1251 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 NSUN2Q08J23 767 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00958-207ENST00000534477 NFATC2Q13469 925 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 DPYSQ14117 519 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 ANO6Q4KMQ2 910 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 FILIP1LQ4L180 1135 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 COLEC12Q5KU26 742 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 MARC1Q5VT66 337 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 LRRC66Q68CR7 880 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 PLEKHA7Q6IQ23 1121 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 PPP1R2P3Q6NXS1 205 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 ZNF574Q6ZN55 896 aaPredicted RBP7.96□□□□□ -1.14
LINC00958-207ENST00000534477 ATG14Q6ZNE5 492 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 CYP4V2Q6ZWL3 525 aaPredicted RBP7.96□□□□□ -1.14
LINC00958-207ENST00000534477 ZNF571Q7Z3V5 609 aaPredicted RBP7.96□□□□□ -1.14
LINC00958-207ENST00000534477 IRF2BP2Q7Z5L9 587 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 GALNT13Q8IUC8 556 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 NAGSQ8N159 534 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 CCDC112Q8NEF3 446 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 GPBAR1Q8TDU6 330 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 HTR3CQ8WXA8 447 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 SCAMP4Q969E2 229 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 TMEM159Q96B96 161 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 AP2M1Q96CW1 435 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 CSPG4P5Q96PW8 444 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 NUDCD1Q96RS6 583 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 EIF3CQ99613 913 aaKnown RBP7.96□□□□□ -1.14
LINC00958-207ENST00000534477 SLC38A3Q99624 504 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 CTRCQ99895 268 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 SEMA3CQ99985 751 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 FRMD8Q9BZ67 464 aaPredicted RBP7.96□□□□□ -1.14
LINC00958-207ENST00000534477 ADAM19Q9H013 955 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 CDH19Q9H159 772 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 SLC39A1Q9NY26 324 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 ZNHIT2Q9UHR6 403 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 PHTF1Q9UMS5 762 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 B3GALT1Q9Y5Z6 326 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 SCINQ9Y6U3 715 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 AHCTF1Q8WYP5 2266 aa7.96□□□□□ -1.14
LINC00958-207ENST00000534477 ZFC3H1O60293 1989 aaKnown RBP7.95□□□□□ -1.14
LINC00958-207ENST00000534477 ATMQ13315 3056 aa7.95□□□□□ -1.14
LINC00958-207ENST00000534477 SETXQ7Z333 2677 aaKnown RBP7.95□□□□□ -1.14
LINC00958-207ENST00000534477 A0A1W2PQC6 194 aa7.95□□□□□ -1.14
LINC00958-207ENST00000534477 CYSRT1A8MQ03 144 aa7.95□□□□□ -1.14
LINC00958-207ENST00000534477 M0R082 166 aa7.95□□□□□ -1.14
LINC00958-207ENST00000534477 DDX3XO00571 662 aaKnown RBP eCLIP7.95□□□□□ -1.142e-14■□□□□ 8.2
LINC00958-207ENST00000534477 PPM1DO15297 605 aa7.95□□□□□ -1.14
LINC00958-207ENST00000534477 RAD1O60671 282 aa7.95□□□□□ -1.14
LINC00958-207ENST00000534477 PPFIA2O75334 1257 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms