RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 VWFP04275 2813 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 A0A1W2PPH5 198 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 HEATR9A2RTY3 570 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 DENND3A2RUS2 1198 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF263O14978 683 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 SPTLC2O15270 562 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 TEX28O15482 410 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 RTN3O95197 1032 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 ESRRBO95718 433 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 WNT1P04628 370 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 NPSP0C0P6 89 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 EBLN1P0CF75 366 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 HKR1P10072 659 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 NDUFB7P17568 137 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 PSMC3P17980 439 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 PGM1P36871 562 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 COPB1P53618 953 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 EEFSECP57772 596 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 MRPS35P82673 323 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 CFHR3Q02985 330 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 CDK18Q07002 472 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 DMC1Q14565 340 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 PTPAQ15257 358 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 PRICKLE4Q2TBC4 344 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 PCID2Q5JVF3 399 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 CCDC30Q5VVM6 783 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 CFAP161Q6P656 301 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 VITQ6UXI7 678 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 Q6YL49 198 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 H1FNTQ75WM6 255 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 PALB2Q86YC2 1186 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 TGIF2LYQ8IUE0 185 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 PPTC7Q8NI37 304 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 ADAMTS18Q8TE60 1221 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 HDAC7Q8WUI4 952 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 UCMAQ8WVF2 138 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 IGSF21Q96ID5 467 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 APOPT1Q96IL0 206 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 COQ10AQ96MF6 247 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 SLITRK1Q96PX8 696 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 CCNL2Q96S94 520 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 MMS19Q96T76 1030 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 MACROD1Q9BQ69 325 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 ADNPQ9H2P0 1102 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 PLEKHA4Q9H4M7 779 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 MRPL17Q9NRX2 175 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 SLC22A11Q9NSA0 550 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 OLA1Q9NTK5 396 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 TBC1D22BQ9NU19 505 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 TMEM161AQ9NX61 479 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 FOXJ2Q9P0K8 574 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 ST3GAL5Q9UNP4 418 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 B3GNT3Q9Y2A9 372 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 RPH3AQ9Y2J0 694 aaPredicted RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 GDAQ9Y2T3 454 aa4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 REXO2Q9Y3B8 237 aaKnown RBP4.71□□□□□ -1.66
ECHDC1-223ENST00000534442 A0A087X0M5 115 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 A0A1B0GX30 115 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 NPIPB13A6NJU9 1138 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 C3orf70A6NLC5 250 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 NPIPB5A8MRT5 1133 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 NPIPB4C9JG80 1138 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 F5H0A9 414 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 QSOX1O00391 747 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 PRYO14603 147 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF213O14771 459 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 USO1O60763 962 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ZC3H11AO75152 810 aaKnown RBP eCLIP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 RNASEH2AO75792 299 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 BAG3O95817 575 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 TTLL1O95922 423 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 F9P00740 461 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ALDOAP04075 364 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ZNF883P0CG24 379 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ARSAP15289 507 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 PRPH2P23942 346 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 GGT5P36269 586 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 STAT6P42226 847 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 DCAF7P61962 342 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 CYP4F2P78329 520 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 MPP3Q13368 585 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 GPR68Q15743 365 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 TSTQ16762 297 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 TMEM266Q2M3C6 531 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 EIF2S3LQ2VIR3 472 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 LSM12Q3MHD2 195 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 AARS2Q5JTZ9 985 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 DENND2CQ68D51 928 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 DBX2Q6ZNG2 339 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 SLC24A5Q71RS6 500 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 BCDIN3DQ7Z5W3 292 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 SPRED1Q7Z699 444 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 RALGPS2Q86X27 583 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 VRK3Q8IV63 474 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 DEFB119Q8N690 84 aa4.7□□□□□ -1.66
ECHDC1-223ENST00000534442 ANKRD52Q8NB46 1076 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms