RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 USP29Q9HBJ7 922 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 TRNAU1APQ9NX07 287 aaKnown RBP9.54□□□□□ -0.88
SSBP3-215ENST00000533946 AMACRQ9UHK6 382 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 APPL1Q9UKG1 709 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 PCDHA3Q9Y5H8 950 aa9.54□□□□□ -0.88
SSBP3-215ENST00000533946 SPENQ96T58 3664 aaKnown RBP9.54□□□□□ -0.88
SSBP3-215ENST00000533946 IGHV5-10-1A0A0J9YXX1 117 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 A0A1W2PQ67 120 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 C9orf172C9J069 976 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 H7C0C1 242 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 C1QL1O75973 258 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 NDST3O95803 873 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 CDK4P11802 303 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 BRAFP15056 766 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF30P17039 623 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 PSMB4P28070 264 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 TEAD1P28347 426 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 SLC5A2P31639 672 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 ATP5OP48047 213 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 RPIAP49247 311 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 CDKN1CP49918 316 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 VAV2P52735 878 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 CTSCP53634 463 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 GDF10P55107 478 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 RPL26P61254 145 aaKnown RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 CLN3Q13286 438 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 NFATC2Q13469 925 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 SPA17Q15506 151 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 KIAA1614Q5VZ46 1190 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 DENND5AQ6IQ26 1287 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 FAM83HQ6ZRV2 1179 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 RAB11FIP2Q7L804 512 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 PID1Q7Z2X4 250 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF438Q7Z4V0 828 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 C11orf96Q7Z7L8 435 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 VSIG1Q86XK7 387 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 TMTC1Q8IUR5 882 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 SPNS2Q8IVW8 549 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 NRSN1Q8IZ57 195 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 BEND7Q8N7W2 519 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 EXD1Q8NHP7 514 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 HTR3CQ8WXA8 447 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 SCG3Q8WXD2 468 aaKnown RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 ATG4AQ8WYN0 398 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 P3H4Q92791 437 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 NAT6Q93015 286 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF830Q96NB3 372 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 BAG1Q99933 345 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 FICDQ9BVA6 458 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 SPATA16Q9BXB7 569 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 OSBPL8Q9BZF1 889 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 GPR63Q9BZJ6 419 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 SEMA4CQ9C0C4 833 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 IL26Q9NPH9 171 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 OCIAD1Q9NX40 245 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 OGFRQ9NZT2 677 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 KLHL8Q9P2G9 620 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 ZNF624Q9P2J8 865 aaPredicted RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 PISDQ9UG56 409 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 RPL26L1Q9UNX3 145 aaKnown RBP9.53□□□□□ -0.88
SSBP3-215ENST00000533946 DNAJC16Q9Y2G8 782 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 WDR37Q9Y2I8 494 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 ARL5AQ9Y689 179 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 SLC30A1Q9Y6M5 507 aa9.53□□□□□ -0.88
SSBP3-215ENST00000533946 IGHV1OR21-1A0A087WYE8 117 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 CCDC78A2IDD5 438 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 PRR19A6NJB7 356 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 A8MU76 341 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 PPP1R12AO14974 1030 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 KLK10O43240 276 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 NUAK1O60285 661 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 PRAMEF10O60809 474 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 METTL18O95568 372 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 FGF3P11487 239 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 ETS1P14921 441 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 ZFXP17010 805 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 TPH1P17752 444 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 CES1P23141 567 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 KELP23276 732 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 CTNNA2P26232 953 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 RPL10P27635 214 aaKnown RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 ADRA1AP35348 466 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 CYLC1P35663 651 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 ABCG1P45844 678 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 DRG2P55039 364 aaKnown RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 INHBCP55103 352 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 NAP1L1P55209 391 aaKnown RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 PPP1CAP62136 330 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 CXADRP78310 365 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 ILF3Q12906 894 aaKnown RBP eCLIP9.52□□□□□ -0.892e-9■□□□□ 9
SSBP3-215ENST00000533946 TFDP2Q14188 446 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 SLC1A5Q15758 541 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 SNAP47Q5SQN1 464 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.52□□□□□ -0.89
SSBP3-215ENST00000533946 PHF19Q5T6S3 580 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 ARHGAP40Q5TG30 622 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 FAM151BQ6UXP7 276 aa9.52□□□□□ -0.89
SSBP3-215ENST00000533946 VASH2Q86V25 355 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms