RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 TNFP01375 233 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 GPR89BP0CG08 455 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 JUNDP17535 347 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 NMBRP28336 390 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 HK3P52790 923 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 CACNG1Q06432 222 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 DHX9Q08211 1270 aaKnown RBP16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 HIF1AQ16665 826 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 ALG11Q2TAA5 492 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 CASC4Q6P4E1 433 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 AFTPHQ6ULP2 937 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 TRIM74Q86UV6 250 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 ALYREFQ86V81 257 aaKnown RBP16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 CCNJLQ8IV13 435 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 KIAA2013Q8IYS2 634 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 PHACTR4Q8IZ21 702 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 AGGF1Q8N302 714 aaeCLIP16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 DDHD1Q8NEL9 900 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 OR2I1PQ8NGU4 316 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 OR1E3Q8WZA6 343 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 TSACCQ96A04 125 aaPredicted RBP16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 NAT9Q9BTE0 207 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 SUDS3Q9H7L9 328 aaPredicted RBP16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 RMI1Q9H9A7 625 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 TM7SF3Q9NS93 570 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 KLF15Q9UIH9 416 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 TMEM98Q9Y2Y6 226 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 OAS3Q9Y6K5 1087 aaKnown RBP16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 GVINP1Q7Z2Y8 2422 aa16.3■□□□□ 0.2
PACSIN3-210ENST00000533686 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 E7ESA3 106 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 VEGFDO43915 354 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 GDF9O60383 454 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 USP1O94782 785 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 ASMTLO95671 621 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 PAMP19021 973 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 EPHA8P29322 1005 aaPredicted RBP16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 FOXN2P32314 431 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 CA5AP35218 305 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 PRAMEP78395 509 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 GUCY2DQ02846 1103 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 SUZ12Q15022 739 aaKnown RBP16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 BBS9Q3SYG4 887 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 ANKRD20A4Q4UJ75 823 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 MSS51Q4VC12 460 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 ZNF542PQ5EBM4 170 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 ZRANB3Q5FWF4 1079 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 GPRC6AQ5T6X5 926 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 STPG1Q5TH74 334 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 KIAA0930Q6ICG6 404 aaPredicted RBP16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 DBX2Q6ZNG2 339 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 ADGRG6Q86SQ4 1221 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 HID1Q8IV36 788 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 NXPE1Q8N323 547 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 OR4L1Q8NH43 312 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 SAP25Q8TEE9 199 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 HEXDCQ8WVB3 486 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 MFSD3Q96ES6 412 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 STAMBPL1Q96FJ0 436 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 PDXPQ96GD0 296 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 EBNA1BP2Q99848 306 aaKnown RBP16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 FAM129AQ9BZQ8 928 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 FOXP3Q9BZS1 431 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 SLC13A1Q9BZW2 595 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 PHACTR1Q9C0D0 580 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 FAM114A2Q9NRY5 505 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 ATXN10Q9UBB4 475 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 SPASTQ9UBP0 616 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 APOBEC3BQ9UH17 382 aaKnown RBP16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 DMGDHQ9UI17 866 aaKnown RBP16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 CRLS1Q9UJA2 301 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 MAD1L1Q9Y6D9 718 aa16.29■□□□□ 0.2
PACSIN3-210ENST00000533686 C4orf47A7E2U8 309 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 EIF3HO15372 352 aaKnown RBP eCLIP16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 GPR39O43194 453 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 NUAK1O60285 661 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 DNAJC6O75061 913 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 PIAS2O75928 621 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 TTC4O95801 387 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 GOT2P00505 430 aaKnown RBP16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 FUCA1P04066 466 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 PGAM1P18669 254 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 POLD2P49005 469 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 PLTPP55058 493 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 TMEM115Q12893 351 aaPredicted RBP16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 TRADDQ15628 312 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 KCTD16Q68DU8 428 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 DOK6Q6PKX4 331 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 ZDHHC24Q6UX98 284 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 KANSL1Q7Z3B3 1105 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 SDR16C5Q8N3Y7 309 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 FSTL5Q8N475 847 aaPredicted RBP16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 OR6P1Q8NGX9 317 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 GDAP1Q8TB36 358 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 NETO1Q8TDF5 533 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 PWWP2AQ96N64 755 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 ZCCHC2Q9C0B9 1178 aaKnown RBP16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 EPB41L5Q9HCM4 733 aa16.28■□□□□ 0.2
PACSIN3-210ENST00000533686 CYP4F12Q9HCS2 524 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms