RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CNPP09543 421 aaKnown RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 FCGR1AP12314 374 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 COX7A2P14406 83 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 HSPA7P48741 367 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 RUNX1T1Q06455 604 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 SIX1Q15475 284 aaPredicted RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 DEFB115Q30KQ5 88 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 PABPC1LQ4VXU2 614 aaKnown RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 SETMARQ53H47 684 aaPredicted RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 ATXN7L2Q5T6C5 722 aaPredicted RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 ERAP2Q6P179 960 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 AFTPHQ6ULP2 937 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 OTOP2Q7RTS6 562 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 LRRC49Q8IUZ0 686 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 SMOQ99835 787 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 PAAF1Q9BRP4 392 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 CHID1Q9BWS9 393 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 SLC25A51Q9H1U9 297 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 RETREG1Q9H6L5 497 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 POLR1BQ9H9Y6 1135 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 RSL24D1Q9UHA3 163 aaKnown RBP12.18□□□□□ -0.46
BDNF-218ENST00000533246 ARL5AQ9Y689 179 aa12.18□□□□□ -0.46
BDNF-218ENST00000533246 AXIN1O15169 862 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 SLC25A14O95258 325 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 AHSGP02765 367 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 RHOQP17081 205 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 VCLP18206 1134 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 CLK3P49761 638 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 INHBCP55103 352 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 GNA12Q03113 381 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 ZNF252P-AS1Q0IIN9 211 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 SPIDRQ14159 915 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 CAND1Q86VP6 1230 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 GRAMD2AQ8IUY3 354 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 STARD8Q92502 1023 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 COPS8Q99627 209 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 C9orf16Q9BUW7 83 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 R3HDMLQ9H3Y0 253 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 FAIMQ9NVQ4 179 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 USE1Q9NZ43 259 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 TBC1D14Q9P2M4 693 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 FKBPLQ9UIM3 349 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 DMTF1Q9Y222 760 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 FCF1Q9Y324 198 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 ZNF142P52746 1687 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 LRP6O75581 1613 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 H3BMM5 538 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 CYP7B1O75881 506 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 NDST3O95803 873 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 TAF1P21675 1872 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 MAPK1P28482 360 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 CRHR2Q13324 411 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 FUT10Q6P4F1 479 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 C15orf39Q6ZRI6 1047 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 EID3Q8N140 333 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 ARL14EPQ8N8R7 260 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 CD99L2Q8TCZ2 262 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 SEC14L1Q92503 715 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 C19orf60Q96EN9 201 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 HIPK3Q9H422 1215 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 TMCC3Q9ULS5 477 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 ZFP37Q9Y6Q3 630 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 EDN1P05305 212 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 HLA-DQB2P05538 268 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 HOXB8P17481 243 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 WARSP23381 471 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 KCNQ1P51787 676 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 MAP3K10Q02779 954 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 SLC10A2Q12908 348 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 CSTF3Q12996 717 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 HNRNPDQ14103 355 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 PRKD1Q15139 912 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 FGD3Q5JSP0 725 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 TSTD2Q5T7W7 516 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 OR52E8Q6IFG1 317 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 GDF6Q6KF10 455 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 AAGABQ6PD74 315 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 TMEM26Q6ZUK4 368 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 USP45Q70EL2 814 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 PLD6Q8N2A8 252 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 STK40Q8N2I9 435 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 RTL3Q8N8U3 475 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 ZNF778Q96MU6 729 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 UROC1Q96N76 676 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 ATP13A3Q9H7F0 1226 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 SPG21Q9NZD8 308 aa12.17□□□□□ -0.46
BDNF-218ENST00000533246 LEF1Q9UJU2 399 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 POLR3HQ9Y535 204 aaPredicted RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 TNPO3Q9Y5L0 923 aaKnown RBP12.17□□□□□ -0.46
BDNF-218ENST00000533246 H0YC42 278 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 IRAK2O43187 625 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 CRYZL1O95825 349 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 IL1BP01584 269 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 ATP5BP06576 529 aaKnown RBP12.16□□□□□ -0.46
BDNF-218ENST00000533246 CES1P23141 567 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 BCAP31P51572 246 aa12.16□□□□□ -0.46
BDNF-218ENST00000533246 GSTM4Q03013 218 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms