RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ASTE1Q2TB18 679 aaPredicted RBP17.64■□□□□ 0.41
PCF11-206ENST00000533018 SLC9B2Q86UD5 537 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 NT5DC3Q86UY8 548 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 IL22RA1Q8N6P7 574 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 CNTD1Q8N815 330 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 NCSTNQ92542 709 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 PMEPA1Q969W9 287 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 RNF25Q96BH1 459 aaPredicted RBP17.64■□□□□ 0.41
PCF11-206ENST00000533018 ANP32EQ9BTT0 268 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 RMI1Q9H9A7 625 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 OCIAD1Q9NX40 245 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 B3GALT1Q9Y5Z6 326 aa17.64■□□□□ 0.41
PCF11-206ENST00000533018 PPP1R12AO14974 1030 aaPredicted RBP17.63■□□□□ 0.41
PCF11-206ENST00000533018 GRID2O43424 1007 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 SLC25A14O95258 325 aaPredicted RBP17.63■□□□□ 0.41
PCF11-206ENST00000533018 ITGB2P05107 769 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 SLC2A4P14672 509 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 ZFXP17010 805 aaPredicted RBP17.63■□□□□ 0.41
PCF11-206ENST00000533018 PTMSP20962 102 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 NFATC3Q12968 1075 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 SQSTM1Q13501 440 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 LINC00303Q3SY05 128 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 ZNF569Q5MCW4 686 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 ZNF648Q5T619 568 aaPredicted RBP17.63■□□□□ 0.41
PCF11-206ENST00000533018 DCAF12Q5T6F0 453 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 CCDC70Q6NSX1 233 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 IYDQ6PHW0 289 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 NPNTQ6UXI9 565 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 B4GALNT4Q76KP1 1039 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 PHYKPLQ8IUZ5 450 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 RHOT2Q8IXI1 618 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 EXD3Q8N9H8 876 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 SH3KBP1Q96B97 665 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 CHP1Q99653 195 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 HERPUD2Q9BSE4 406 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 GPR63Q9BZJ6 419 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 FAM117AQ9C073 453 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 OR2AG1Q9H205 316 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 OSGEPL1Q9H4B0 414 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 NHEJ1Q9H9Q4 299 aaPredicted RBP17.63■□□□□ 0.41
PCF11-206ENST00000533018 ABHD10Q9NUJ1 306 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 ATXN10Q9UBB4 475 aa17.63■□□□□ 0.41
PCF11-206ENST00000533018 HEMK1Q9Y5R4 338 aaPredicted RBP17.63■□□□□ 0.41
PCF11-206ENST00000533018 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.62■□□□□ 0.41
PCF11-206ENST00000533018 SLC28A2O43868 658 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 NUAK1O60285 661 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 ZNF8P17098 575 aaPredicted RBP17.62■□□□□ 0.41
PCF11-206ENST00000533018 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.62■□□□□ 0.41
PCF11-206ENST00000533018 SLC9A4Q6AI14 798 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 PRICKLE2Q7Z3G6 844 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 IMP4Q96G21 291 aaKnown RBP17.62■□□□□ 0.41
PCF11-206ENST00000533018 ZSCAN5AQ9BUG6 496 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 ASPSCR1Q9BZE9 553 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 CARD9Q9H257 536 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 SARS2Q9NP81 518 aaKnown RBP17.62■□□□□ 0.41
PCF11-206ENST00000533018 KLC4Q9NSK0 619 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 KLHL3Q9UH77 587 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 PCDHGA3Q9Y5H0 932 aa17.62■□□□□ 0.41
PCF11-206ENST00000533018 C3orf70A6NLC5 250 aaPredicted RBP17.61■□□□□ 0.41
PCF11-206ENST00000533018 ZNF487B1APH4 448 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 PYCARD-AS1I3L0S3 204 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 MTA2O94776 668 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 FAM87AP0C7U9 286 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 F3P13726 295 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 WT1P19544 449 aaPredicted RBP17.61■□□□□ 0.41
PCF11-206ENST00000533018 CDK18Q07002 472 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 PLA2G4EQ3MJ16 856 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 ANKS6Q68DC2 871 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 CRTC3Q6UUV7 619 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 GPR26Q8NDV2 337 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 SPATA22Q8NHS9 363 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 NKD1Q969G9 470 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 EID2BQ96D98 161 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 DDA1Q9BW61 102 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.61■□□□□ 0.41
PCF11-206ENST00000533018 BRD8Q9H0E9 1235 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 SLC25A51Q9H1U9 297 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 PRDM8Q9NQV8 689 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 ZNF711Q9Y462 761 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 HYOU1Q9Y4L1 999 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 SPTA1P02549 2419 aa17.61■□□□□ 0.41
PCF11-206ENST00000533018 ASH1LQ9NR48 2969 aaKnown RBP17.6■□□□□ 0.41
PCF11-206ENST00000533018 KIR2DS5A0A0G2JLQ3 304 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 A0A0G2JNG1 304 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 B4E171 279 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 KIR2DS3K7RE56 304 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 SPOPO43791 374 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 PMPCBO75439 489 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 MT-CYBP00156 380 aaPredicted RBP17.6■□□□□ 0.41
PCF11-206ENST00000533018 UGT1A3P35503 534 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 TSPAN7P41732 249 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 ARSDP51689 593 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 RAB15P59190 212 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 KIR2DS5Q14953 304 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 TBR1Q16650 682 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 INSCQ1MX18 579 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 KAZNQ674X7 775 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 WDR74Q6RFH5 385 aaPredicted RBP17.6■□□□□ 0.41
PCF11-206ENST00000533018 XKR5Q6UX68 686 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 VSIG1Q86XK7 387 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms