RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 ZNHIT2Q9UHR6 403 aa17.64■□□□□ 0.41
SMG1-203ENST00000532700 NDST3O95803 873 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 ITGA2BP08514 1039 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 ACP5P13686 325 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 ZNF8P17098 575 aaPredicted RBP17.63■□□□□ 0.41
SMG1-203ENST00000532700 ARSDP51689 593 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 SLC14A2Q15849 920 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 CCDC50Q8IVM0 306 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 TTC30BQ8N4P2 665 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 ALG3Q92685 438 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 SPATA16Q9BXB7 569 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 GRPEL1Q9HAV7 217 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 MAGEE1Q9HCI5 957 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 VPS18Q9P253 973 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 SLC23A2Q9UGH3 650 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 DNPEPQ9ULA0 475 aa17.63■□□□□ 0.41
SMG1-203ENST00000532700 SDK2Q58EX2 2172 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 IGHV1OR21-1A0A087WYE8 117 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 PRAMEF33A0A0G2JMD5 474 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 IGHV5-10-1A0A0J9YXX1 117 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 LOC285095A0A1B0GVY8 99 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 RHPN2P1A8MT19 583 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 EFSO43281 561 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 BUD23O43709 281 aaKnown RBP17.62■□□□□ 0.41
SMG1-203ENST00000532700 PRAMEF10O60809 474 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 C1QL1O75973 258 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 ZRANB2O95218 330 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMG1-203ENST00000532700 CCL4P13236 92 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 CTNNA1P35221 906 aaKnown RBP17.62■□□□□ 0.41
SMG1-203ENST00000532700 NR2C2P49116 596 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 WNT3AP56704 352 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 TFDP2Q14188 446 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 PTPRCAPQ14761 206 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 PLA2G4EQ3MJ16 856 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 MAP9Q49MG5 647 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 ODF2Q5BJF6 829 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 SIRPB2Q5JXA9 342 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 PHF19Q5T6S3 580 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 ARHGAP40Q5TG30 622 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 BBS12Q6ZW61 710 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 ADGRG6Q86SQ4 1221 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 DAAM2Q86T65 1068 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 SFRP1Q8N474 314 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 SLC25A41Q8N5S1 370 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 CCDC74BQ96LY2 380 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 TMEM74Q96NL1 305 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 OR2AG1Q9H205 316 aa17.62■□□□□ 0.41
SMG1-203ENST00000532700 SCHIP1Q9P0W5 487 aaPredicted RBP17.62■□□□□ 0.41
SMG1-203ENST00000532700 GRID2IPA4D2P6 1211 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 C9orf172C9J069 976 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 NUAK1O60285 661 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 CPNE6O95741 557 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 RBL1P28749 1068 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 DCDC1P59894 354 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.61■□□□□ 0.41
SMG1-203ENST00000532700 CRTC3Q6UUV7 619 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 JAMLQ86YT9 394 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 ZNF547Q8IVP9 402 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 RAVER1Q8IY67 606 aaKnown RBP17.61■□□□□ 0.41
SMG1-203ENST00000532700 RCOR2Q8IZ40 523 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 TXLNBQ8N3L3 684 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 LRRC57Q8N9N7 239 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 CCHCR1Q8TD31 782 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 NAT14Q8WUY8 206 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 P3H4Q92791 437 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 GPR63Q9BZJ6 419 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 PRDM8Q9NQV8 689 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 HAUS2Q9NVX0 235 aa17.61■□□□□ 0.41
SMG1-203ENST00000532700 KLHL8Q9P2G9 620 aaPredicted RBP17.61■□□□□ 0.41
SMG1-203ENST00000532700 ATMQ13315 3056 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 PRR19A6NJB7 356 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 GAPDHSO14556 408 aaPredicted RBP17.6■□□□□ 0.41
SMG1-203ENST00000532700 SNX2O60749 519 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 PYGLP06737 847 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 OTUD4Q01804 1114 aaKnown RBP17.6■□□□□ 0.41
SMG1-203ENST00000532700 PPP2R5EQ16537 467 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 ZNF569Q5MCW4 686 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 GPR155Q7Z3F1 870 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 ZFAND4Q86XD8 727 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 TRAM1L1Q8N609 369 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 IPMKQ8NFU5 416 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 ACTL9Q8TC94 416 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 HTR3CQ8WXA8 447 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 GLYATL1Q969I3 302 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 DESI2Q9BSY9 194 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 STRADBQ9C0K7 418 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 NFKBIL1Q9UBC1 381 aaPredicted RBP17.6■□□□□ 0.41
SMG1-203ENST00000532700 FAM153AQ9UHL3 310 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 PACSIN2Q9UNF0 486 aaPredicted RBP17.6■□□□□ 0.41
SMG1-203ENST00000532700 PCDHA3Q9Y5H8 950 aa17.6■□□□□ 0.41
SMG1-203ENST00000532700 RGSL1A5PLK6 1076 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 PJA2O43164 708 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 GRID2O43424 1007 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 SLC25A14O95258 325 aaPredicted RBP17.59■□□□□ 0.41
SMG1-203ENST00000532700 AGTP01019 485 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 PYGMP11217 842 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 WT1P19544 449 aaPredicted RBP17.59■□□□□ 0.41
SMG1-203ENST00000532700 FASLGP48023 281 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 MAPK10P53779 464 aa17.59■□□□□ 0.41
SMG1-203ENST00000532700 LRP8Q14114 963 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms