RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SLITRK1Q96PX8 696 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ZBTB18Q99592 522 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TMEM245Q9H330 911 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC35C2Q9NQQ7 365 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ITM2CQ9NQX7 267 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SIRPGQ9P1W8 387 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TNFSF13BQ9Y275 285 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PCDHB12Q9Y5F1 795 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 E5RJQ4 531 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 POLR1CO15160 346 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 AXIN1O15169 862 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ACSL4O60488 711 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ATG7O95352 703 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 URODP06132 367 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 THRBP10828 461 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 IL7P13232 177 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC15A1P46059 708 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 NAGLUP54802 743 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 C1QBPQ07021 282 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 FRG1Q14331 258 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PLEKHG6Q3KR16 790 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ATP13A4Q4VNC1 1196 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC39A12Q504Y0 691 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 RBM48Q5RL73 367 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CLVS2Q5SYC1 327 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM182AQ5T1J6 154 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 AGAP9Q5VTM2 703 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SLC39A4Q6P5W5 647 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 LYSMD3Q7Z3D4 306 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 LINC00523Q86TU6 105 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CPNE8Q86YQ8 564 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PM20D2Q8IYS1 436 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ADGRF2Q8IZF7 708 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ESX1Q8N693 406 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CANT1Q8WVQ1 401 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CPT1BQ92523 772 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 NDRG1Q92597 394 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 SEMA4DQ92854 862 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TOP1MTQ969P6 601 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.76□□□□□ -1.331e-6■■■■■ 41.3
TGFBR3-209ENST00000532540 CCDC120Q96HB5 630 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 FBXL20Q96IG2 436 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 TXNDC15Q96J42 360 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF597Q96LX8 424 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 PCDHB18PQ96TA0 734 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CISHQ9NSE2 258 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CXXC1Q9P0U4 656 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CDH7Q9ULB5 785 aa6.76□□□□□ -1.33
TGFBR3-209ENST00000532540 CLUHO75153 1309 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CNTNAP2Q9UHC6 1331 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 A0A096LPK6 155 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MYO1GB0I1T2 1018 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 BHMG1C9JSJ3 638 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PRR23D1E9PI22 279 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MT-CO1P00395 513 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PRR23D2P0DMB1 279 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 F8A1P23610 371 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 IVDP26440 423 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 OR1D2P34982 312 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ABCG1P45844 678 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 GLRBP48167 497 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 TAS2R40P59535 323 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SEMA3AQ14563 771 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 TARBP2Q15633 366 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 HYIQ5T013 277 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 RAP1GAP2Q684P5 730 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PGM2L1Q6PCE3 622 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 RASSF6Q6ZTQ3 369 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 TAS1R3Q7RTX0 852 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CAND1Q86VP6 1230 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 FAM71AQ8IYT1 594 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MPP5Q8N3R9 675 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 LRRC17Q8N6Y2 441 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ANGPTL6Q8NI99 470 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 EDEM1Q92611 657 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SNAPC3Q92966 411 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF669Q96BR6 464 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 TDRD1Q9BXT4 1180 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 KATNBL1Q9H079 304 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 NMRAL1Q9HBL8 299 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ANKHQ9HCJ1 492 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CCNB1IP1Q9NPC3 277 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SIX2Q9NPC8 291 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MBD2Q9UBB5 411 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 OGDHLQ9ULD0 1010 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 OAZ3Q9UMX2 235 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 FNDC3AQ9Y2H6 1198 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 NDUFAF1Q9Y375 327 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 MTF2Q9Y483 593 aaPredicted RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ZDBF2Q9HCK1 2354 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 KCNU1A8MYU2 1149 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 PLIN3O60664 434 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ZNF806P0C7X5 589 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 HLA-DPA1P20036 260 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 ERP29P30040 261 aaKnown RBP6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 FMO4P31512 558 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 WNT7BP56706 349 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 CD300CQ08708 224 aa6.75□□□□□ -1.33
TGFBR3-209ENST00000532540 SELENBP1Q13228 472 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms